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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6t1wB_

Fold library idPDB HeaderMoleculeTitle
c6t1wB_3.79PDB header: membrane proteinChain: B: PDB Molecule: outer membrane protein assembly factor bama;


Added to library: Sat May 16 08:34:39 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT
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Known secondary structure (DSSP)



TTTT


TT



T
SS


TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VKLRVNVDAGNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTVD
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Known secondary structure (DSSP)



TTTTTTTS
S

SS
TT
STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYS
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Known secondary structure (DSSP)





GGGGTBS



B

SSS




B
 .........220.........230.........240.........250.........260.........270.........280
Sequence MGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPI
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Known secondary structure (DSSP) T



SSB




S
SSS

S
TT
SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence DDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECA
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Known secondary structure (DSSP) STTS
SSSS



GGG
B
B
SSSSST
TT
BS


BB
SS

SSS

SSB
 .........360.........370.........380.........390.........400.........410.........420
Sequence TQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYS
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Known secondary structure (DSSP) GGGS

S


BS
SSS
TTTTTS
SS

TTT
TTS

TT
 .........430.........440.........450.........460......
Sequence DPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNIG
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Known secondary structure (DSSP)





BTTB



TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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