PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6sytA_

Fold library id	PDB Header	Molecule	Title
c6sytA_	3.45	PDB header: signaling protein	Chain: A: PDB Molecule: smg1,serine/threonine-protein kinase smg1,smg1,

Links to external resources
Added to library: Sat Dec 14 08:50:41 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X F S T N F R D T V D I L V G S L T Q Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V S G W L Q S L E A F S T T L L G Q F L E D M E A Y A E D L S S V S L P K L A A L L R V F S T V V R S I A Y V T D V L Y R V M R C V T A A N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence Q V F F S E A V L T A A N E C V G V L L G S L D P S M T I H C D M V I T Y G L D Q L E N C Q T C G T D Y I I S V L N L L T L I V E Q I N T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S
T T
S S
T T S
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence L P S S F V E K L F I P S S K L L F L R Y H K E K E V V A V A H A V Y Q A V L S L K N I P V L E T A Y K L I L G E M T C A L N N L L H S L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T
S S T T
S
S T T T G G G S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence L P E A C S E I K H E A F K N H V F N V D N A K F V V I F D L S A L T T I G N A K N L S P T V F A L L S K N L M I V H S D L A V H F P A I Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T S S
T
S
T T T G G G G T T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence Y A V L Y T L Y S H C T R H D H F I S S S K K H F S I I L N L L G I L L K K D N L N Q D T R K L L M T W A L E A A V L M R K S E T Y A P L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T G G G
T T
S T
S
T S
G G G
G G G

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence S L P S F H K F C K G L L A N T L V E D V N I C L Q A C S S L H A L S S S L P D D L L Q R C V D V C R V Q L V H S G T R I R Q A F G K L L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S S S
T T S S
S S
S S S T T T T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence S I P L D V V L S N N N H T E I Q E I S L A L R S H M S K A P S N T F H P Q D F S D V I S F I L Y G N S H R T N W L E R L F Y S C Q R L D K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T T S S
T S
T S
T T
S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence T I P R N L L K T D A V L W Q W A I W E A A Q F T V L S K L R T P L G R A Q D T F Q T I E G I I R S L A A H T L N P D Q D V S Q W T T A D N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S
T T T
T T
S S T T S
T T T S
S S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence D E G H G N N Q L R L V L L L Q Y L E N L E K L M Y N A Y E G C A N A L T R T F F Y T N R Q T C Q D W L T R I R L S I M R V G L L A G Q P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S S
S S T T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence V T V R H G F D L L T E M K T N E L E V T I M M V V E A L C E L H C P E A I Q G I A V W S S S I N L L W I N S V A Q Q A E G R F E K A S V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
T
T T T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence Y Q E H L C A M T G V D C C I S S F D K S V L T L A N S S P E V I N Y L G N K A C E C Y I S I A D W A A V Q E W Q N A I H D L K K S T S S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
S
G G G
T T T
T
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence S L N L K A D F N Y I K S L S S F E S G K F V E C T E Q L E L L P G E N I N L D M K K L L P N M L S P D P R E L Q K S I E V Q L L R S S V C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T T T
T T S S S S
T T
S
S S
S S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence L A T A L N W Q S I T E N V V K Y L K Q T S R I A I G P L R L S T L T V S Q S L P V L S T L Q L Y C S S A L E N T V S N R L S T E D C L I P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T T T T
S S
S T T T T
S G G G S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence L F S E A L R S C K Q H D V R P W M Q A L R Y T M Y Q N Q L L E K I K E Q T V P I R S H L M E L G L T A A K F A R K R G N V S L A T R L L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G G T
T T S
S T G G G G
S
T T T

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence Q C S E T T A Q D L V Q H F K K W G P E L D I E K T K L L Y T A G Q S T H A M E M L S S C A I S F C K S V K A E Y A V A K S I L T L A K W I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T T
T S S S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence Q A E W K E I S G Q L K Q V Y R A Q H Q L S T L S K N I L T L I E L P S E S E S T V H I G V G E P D F I L G Q L Y H L S S V Q A P E V A K S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T T T T
S
G G G
T
T T
S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence W A A L A S W A Y R W G R K V V D N A S X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X E G V I K V W R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T
T

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence K V V D R I F S L Y K L S C S A Y F T F L K L N A S T D D M I V M A T L R L L R L L V K H A G E L R Q Y L E H G L E T P W R G I I P Q L F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S T T T T T T
G G G S T

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence R L N H P E V Y V R Q S I C N L L C R V A Q D S P H L I L Y P A I V G T I Q A M M Q D C Y S K I V D K L S S A N P T M V L Q V Q M L V A E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S S
T T
T T T
T T

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence R R V T W D E L W L G V L L Q Q H M Y V L X X X X X X X X X X X X X X X X P H E K W F Q D N Y G D A I E N A L E K L K X X X X X X X X X X X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence X X X X X Y I L R L E E I T N T E I A L P G V T I H S V G T I T I L P T K P K K L L F L G S D S Y P Y L F K G L E D L H L D E R I M Q F L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
B
B B
B
T T
T T

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence I V N T M F A T I N R Q E T P R F H A R H Y S V T P L G T R S G L I Q W V D G A T P L F G L Y K R W Q Q R E A A L Q A Q K X X X X X X X X X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T
S S
B
S S S
S S
S T T

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750

Sequence X X X X X X X X X W P L H V M K A V L E E L M E A T P P N L L A K E L W S S C T T P D E W W R V T Q S Y A R S T A V M S M V G Y I I G L G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
S T T S G G G S S S S T

. . . . . . . . . 1760 . . . . . . . . . 1770 . . . . . . . . . 1780 . . . . . . . . . 1790 . . . . . . . . . 1800 . . . . . . . . . 1810 . . . . . . . . . 1820

Sequence R H L D N V L I D M T T G E V V H I D Y N V C F E K G K S L R V P E K V P F R M T Q N I E T A L G V T G V E G V F R L S C E Q V L H I M R R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T T
T T S
S S
G G G S S S
S S
T T S
T T T T S S

. . . . . . . . . 1830 . . . . . . . . . 1840 . . . . . . . . . 1850 . . . . . . . . . 1860 . . . . . . . . . 1870 . . . . . . . . . 1880 . . . . . . . . . 1890

Sequence G R E T L L T L L E A F V Y D P L V D W T S Y A V S V W K R V K A K L E G R D V D P N R R M S V A E Q V D Y V I K E A T N L D N L A Q L Y E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S
T T T
S S S S S S
S S S
G

. . . . . .

Sequence G W T A W V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	F	S	T	N	F	R	D	T	V	D	I	L	V	G	S	L	T	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S																																															T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	S	G	W	L	Q	S	L	E	A	F	S	T	T	L	L	G	Q	F	L	E	D	M	E	A	Y	A	E	D	L	S	S	V	S	L	P	K	L	A	A	L	L	R	V	F	S	T	V	V	R	S	I	A	Y	V	T	D	V	L	Y	R	V	M	R	C	V	T	A	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													T	T				S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	V	F	F	S	E	A	V	L	T	A	A	N	E	C	V	G	V	L	L	G	S	L	D	P	S	M	T	I	H	C	D	M	V	I	T	Y	G	L	D	Q	L	E	N	C	Q	T	C	G	T	D	Y	I	I	S	V	L	N	L	L	T	L	I	V	E	Q	I	N	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																		T	T	S		T	T																				S	S			T	T																S		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	P	S	S	F	V	E	K	L	F	I	P	S	S	K	L	L	F	L	R	Y	H	K	E	K	E	V	V	A	V	A	H	A	V	Y	Q	A	V	L	S	L	K	N	I	P	V	L	E	T	A	Y	K	L	I	L	G	E	M	T	C	A	L	N	N	L	L	H	S	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	T	T							T	T		S	S															T	T		S		S	T	T	T																				G	G	G	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	P	E	A	C	S	E	I	K	H	E	A	F	K	N	H	V	F	N	V	D	N	A	K	F	V	V	I	F	D	L	S	A	L	T	T	I	G	N	A	K	N	L	S	P	T	V	F	A	L	L	S	K	N	L	M	I	V	H	S	D	L	A	V	H	F	P	A	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S			S	T	T	S	S																								T						S								T	T	T	G	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	A	V	L	Y	T	L	Y	S	H	C	T	R	H	D	H	F	I	S	S	S	K	K	H	F	S	I	I	L	N	L	L	G	I	L	L	K	K	D	N	L	N	Q	D	T	R	K	L	L	M	T	W	A	L	E	A	A	V	L	M	R	K	S	E	T	Y	A	P	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	G	G	G		T	T				S													T		S																						T	S		G	G	G		G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	L	P	S	F	H	K	F	C	K	G	L	L	A	N	T	L	V	E	D	V	N	I	C	L	Q	A	C	S	S	L	H	A	L	S	S	S	L	P	D	D	L	L	Q	R	C	V	D	V	C	R	V	Q	L	V	H	S	G	T	R	I	R	Q	A	F	G	K	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S														S	S	S	S																T	T	S	S																S	S		S	S	S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	I	P	L	D	V	V	L	S	N	N	N	H	T	E	I	Q	E	I	S	L	A	L	R	S	H	M	S	K	A	P	S	N	T	F	H	P	Q	D	F	S	D	V	I	S	F	I	L	Y	G	N	S	H	R	T	N	W	L	E	R	L	F	Y	S	C	Q	R	L	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S	T	T	T	S	S																			T	S																				T	S							T	T										S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	I	P	R	N	L	L	K	T	D	A	V	L	W	Q	W	A	I	W	E	A	A	Q	F	T	V	L	S	K	L	R	T	P	L	G	R	A	Q	D	T	F	Q	T	I	E	G	I	I	R	S	L	A	A	H	T	L	N	P	D	Q	D	V	S	Q	W	T	T	A	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	S	S																				T	T	T			T	T		S																					S	T	T	S			T	T	T	S			S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	D	E	G	H	G	N	N	Q	L	R	L	V	L	L	L	Q	Y	L	E	N	L	E	K	L	M	Y	N	A	Y	E	G	C	A	N	A	L	T	R	T	F	F	Y	T	N	R	Q	T	C	Q	D	W	L	T	R	I	R	L	S	I	M	R	V	G	L	L	A	G	Q	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																												T			S	S	S							S	S	T																						T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	T	V	R	H	G	F	D	L	L	T	E	M	K	T	N	E	L	E	V	T	I	M	M	V	V	E	A	L	C	E	L	H	C	P	E	A	I	Q	G	I	A	V	W	S	S	S	I	N	L	L	W	I	N	S	V	A	Q	Q	A	E	G	R	F	E	K	A	S	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														G	G	G	T														T				T	T									T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	Y	Q	E	H	L	C	A	M	T	G	V	D	C	C	I	S	S	F	D	K	S	V	L	T	L	A	N	S	S	P	E	V	I	N	Y	L	G	N	K	A	C	E	C	Y	I	S	I	A	D	W	A	A	V	Q	E	W	Q	N	A	I	H	D	L	K	K	S	T	S	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S					S		S						G	G	G																				T	T	T																				T		S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	S	L	N	L	K	A	D	F	N	Y	I	K	S	L	S	S	F	E	S	G	K	F	V	E	C	T	E	Q	L	E	L	L	P	G	E	N	I	N	L	D	M	K	K	L	L	P	N	M	L	S	P	D	P	R	E	L	Q	K	S	I	E	V	Q	L	L	R	S	S	V	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S												T	T	T										T	T	S	S	S	S							T	T		S		S	S			S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	L	A	T	A	L	N	W	Q	S	I	T	E	N	V	V	K	Y	L	K	Q	T	S	R	I	A	I	G	P	L	R	L	S	T	L	T	V	S	Q	S	L	P	V	L	S	T	L	Q	L	Y	C	S	S	A	L	E	N	T	V	S	N	R	L	S	T	E	D	C	L	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S															T	T							T	T	T	T		S	S			S																	T	T	T	T		S	G	G	G	S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	L	F	S	E	A	L	R	S	C	K	Q	H	D	V	R	P	W	M	Q	A	L	R	Y	T	M	Y	Q	N	Q	L	L	E	K	I	K	E	Q	T	V	P	I	R	S	H	L	M	E	L	G	L	T	A	A	K	F	A	R	K	R	G	N	V	S	L	A	T	R	L	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	G	G	T		T	T	S		S	T															G	G	G	G			S																						T	T	T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	Q	C	S	E	T	T	A	Q	D	L	V	Q	H	F	K	K	W	G	P	E	L	D	I	E	K	T	K	L	L	Y	T	A	G	Q	S	T	H	A	M	E	M	L	S	S	C	A	I	S	F	C	K	S	V	K	A	E	Y	A	V	A	K	S	I	L	T	L	A	K	W	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S											S													T	T	T																		T	S	S	S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	Q	A	E	W	K	E	I	S	G	Q	L	K	Q	V	Y	R	A	Q	H	Q	L	S	T	L	S	K	N	I	L	T	L	I	E	L	P	S	E	S	E	S	T	V	H	I	G	V	G	E	P	D	F	I	L	G	Q	L	Y	H	L	S	S	V	Q	A	P	E	V	A	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		T	T	T											T	T														S						G	G	G																						T		T	T		S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	W	A	A	L	A	S	W	A	Y	R	W	G	R	K	V	V	D	N	A	S	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	E	G	V	I	K	V	W	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T																											T																		T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	K	V	V	D	R	I	F	S	L	Y	K	L	S	C	S	A	Y	F	T	F	L	K	L	N	A	S	T	D	D	M	I	V	M	A	T	L	R	L	L	R	L	L	V	K	H	A	G	E	L	R	Q	Y	L	E	H	G	L	E	T	P	W	R	G	I	I	P	Q	L	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T																T																							S	S	T	T	T	T						T	T			G	G	G	S						T
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	R	L	N	H	P	E	V	Y	V	R	Q	S	I	C	N	L	L	C	R	V	A	Q	D	S	P	H	L	I	L	Y	P	A	I	V	G	T	I	Q	A	M	M	Q	D	C	Y	S	K	I	V	D	K	L	S	S	A	N	P	T	M	V	L	Q	V	Q	M	L	V	A	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S	S																	T	T			T	T	T																										T	T
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	R	R	V	T	W	D	E	L	W	L	G	V	L	L	Q	Q	H	M	Y	V	L	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	P	H	E	K	W	F	Q	D	N	Y	G	D	A	I	E	N	A	L	E	K	L	K	X	X	X	X	X	X	X	X	X	X	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																																T	T																									T	T
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	X	X	X	X	X	Y	I	L	R	L	E	E	I	T	N	T	E	I	A	L	P	G	V	T	I	H	S	V	G	T	I	T	I	L	P	T	K	P	K	K	L	L	F	L	G	S	D	S	Y	P	Y	L	F	K	G	L	E	D	L	H	L	D	E	R	I	M	Q	F	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	T	T							B					B	B																				B										T	T			T	T
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	I	V	N	T	M	F	A	T	I	N	R	Q	E	T	P	R	F	H	A	R	H	Y	S	V	T	P	L	G	T	R	S	G	L	I	Q	W	V	D	G	A	T	P	L	F	G	L	Y	K	R	W	Q	Q	R	E	A	A	L	Q	A	Q	K	X	X	X	X	X	X	X	X	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S					T	T		S	S									B				S	S	S								S	S				S																T	T
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750
Sequence	X	X	X	X	X	X	X	X	X	W	P	L	H	V	M	K	A	V	L	E	E	L	M	E	A	T	P	P	N	L	L	A	K	E	L	W	S	S	C	T	T	P	D	E	W	W	R	V	T	Q	S	Y	A	R	S	T	A	V	M	S	M	V	G	Y	I	I	G	L	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T																T	T	S		S	T	T	S					G	G	G	S	S	S	S																									T
	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820
Sequence	R	H	L	D	N	V	L	I	D	M	T	T	G	E	V	V	H	I	D	Y	N	V	C	F	E	K	G	K	S	L	R	V	P	E	K	V	P	F	R	M	T	Q	N	I	E	T	A	L	G	V	T	G	V	E	G	V	F	R	L	S	C	E	Q	V	L	H	I	M	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S					T	T	T								T	T	S		S	S		G	G	G	S	S	S					S	S								T	T	S		T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890
Sequence	G	R	E	T	L	L	T	L	L	E	A	F	V	Y	D	P	L	V	D	W	T	S	Y	A	V	S	V	W	K	R	V	K	A	K	L	E	G	R	D	V	D	P	N	R	R	M	S	V	A	E	Q	V	D	Y	V	I	K	E	A	T	N	L	D	N	L	A	Q	L	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													S		S	S						T	T													T		S	S	S	S	S	S																						S	S	S		G
	.	.	.	.	.	.
Sequence	G	W	T	A	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G