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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6sxbF_

Fold library idPDB HeaderMoleculeTitle
c6sxbF_7.90PDB header: dna binding proteinChain: F: PDB Molecule: dna repair endonuclease xpf;


Added to library: Sat Mar 14 08:37:39 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RIAMAPLLEYERQLVLELLDTDGLVVCARGLGADRLLYHFLQLHCHPACLVLVLNTQPAEEEYFINQLKI
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Known secondary structure (DSSP)

S

S

TTTTTS

SSSSST
SSSSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence EGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLTDRIPSDLITGILVYRAHRIIESCQEAFI
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Known secondary structure (DSSP) T
SS



TTS
STTTTT


TTTT
S

S



GGG
SSS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence LRLFRQKNKRGFIKAFTDNAVAFDTGFCHVERVMRNLFVRKLYLWPRFHVAVNSFLEQHKPEVVEIHVSM
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Known secondary structure (DSSP) TT
SSS


GGGS

TT

TTT





TT
SSSS



 .........220.........230.........240.........250.........260.........270.........280
Sequence TPTMLAIQTAILDILNACLKELKCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDL
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Known secondary structure (DSSP)
S

SSTTT
SSSSSTT


TTTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence KILRTLLQYLSQYDCVTFLNLLESLRATEKAFGQNSGWLFLDSSTSMFINARARLESNPKWEALTEVLKE
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Known secondary structure (DSSP) S
STTSSSS
GGGSSS
T




 .........360.........370.........380.........390.........400.........410.........420
Sequence IEAENKESEALGGPGQVLICASDDRTCSQLRDYITLGAEAFLLRLYRKTFLTIIHPLLGCSDPYALTRVL
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Known secondary structure (DSSP) T
SS





SS
ST


SSSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence HEVEPRYVVLYDAELTFVRQLEIYRASRPGKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASM
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Known secondary structure (DSSP) S

S

S

TTS


TT
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence TQQSIVVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPEMCVERKSISDLIGSLNNGRLYSQCISMS
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Known secondary structure (DSSP)





GGG
SSSTTTT







SS
STT
TTST
 .........570.........580.........590.........600.........610.........620.........630
Sequence RYYKRPVLLIEFDPSKPFSLTSRGALFQEISSNDISSKLTLLTLHFPRLRILWCPSPHATAELFEELKQS
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Known secondary structure (DSSP) TTSS

SSS





TTTSSSSSS
SS
SS

SSTTSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence KPQPDAATANPGPQDFLLKMPGVNAKNCRSLMHHVKNIAELAALSQDELTSILGNAANAKQLYDFIHTSF
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Known secondary structure (DSSP)




STT

TSTT

TT


SS


S


 .
Sequence A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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