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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6sp2F_

Fold library idPDB HeaderMoleculeTitle
c6sp2F_3.33PDB header: membrane proteinChain: F: PDB Molecule: membrane protein tms1d;


Added to library: Sat Jan 4 08:19:55 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSCTNASSSRFMYAFILLVGTVLGAIALSPGLQDTLKKMPFCINSSLQVDCEYALGYMAVYRVCFGMACF
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Known secondary structure (DSSP)
TSS
TTTTTTGGGSSS
TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence FALMSLIMLGVKSSRDPRSHIQNNFWPLKFLICFGAAIGAIFIPDGSFGPAMMWVGLIGGLAFILVQLVI
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Known secondary structure (DSSP) S
S

STTSGGGGTTTS
TT

SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IVDFAHSLAENWIESAENSRGYYYALAGVTLLCYILSLTGITLLYIYFTTSTGCGINKFFISINLIFCLA
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Known secondary structure (DSSP) TTSSTTS

SSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ISVISILPAVQERLPHSGLLQSSLVTLYTVYLTWSAVANNPEKECNPGMFGHTTRVTFDTTNIIGLVVWL
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Known secondary structure (DSSP) TTS
TT

STT


TTT
TTTT








 .........290.........300.........310.........320.........330.........340.........350
Sequence LCILYNCISSAVETEGVTYSWSMFHLVFVCASLYVMMTLTNWYKPHSEIELFNGNEASMWVKIVSSWLGV
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Known secondary structure (DSSP) TT





S
SS
TTT

TT

TTT
S

S
 .........360.....
Sequence FIYGWSLAAPIVLTN
Predicted secondary structure





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Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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