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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6sj9A_

Fold library idPDB HeaderMoleculeTitle
c6sj9A_2.20PDB header: transcriptionChain: A: PDB Molecule: proteasome accessory factor b/c (pafbc);


Added to library: Sat Oct 19 08:42:49 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GASRTERLLNLLLALLNTKVGLPRAVLREKVYHDSADNDVAFGRXFERDKVDLKQFGFEIETLXDPASAR
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Known secondary structure (DSSP)

SS

SS

S
TT






S
 .........80.........90.........100.........110.........120.........130.........140
Sequence YRIGKDSNRLPDVSLTPAESTVLLLAAQLWERAALGSAAANAVDVDLPAGVQPRIKPAGQAFDDVVAAXH
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Known secondary structure (DSSP) SSTT
S



T






TT







 .........150.........160.........170.........180.........190.........200.........210
Sequence GKHPIRFGYQAVSTGREEVREVEPWGLGSRFGQWYLVGLDRGRGAKRVFRLSRXTTAISVLTTGSFHPPK
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Known secondary structure (DSSP) T


TTS

TTTTTTGGGB
S


TT





S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DFNARAELDELNELPVRQATLVIDKDKLLALRKKATSLQDAPDESGRDRITVDFRDPEQLAEELASYGPH
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Known secondary structure (DSSP) S

T





TT

T
SS
TTS
TGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence VKVTGPAELSAAVVRRLQAAADFDDAPLPPLEFPEAGRAPRARKRTSEDQLARXLQLVPFLVHHQGLHIQ
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Known secondary structure (DSSP)
S








SSSS






BSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence EVADHFGISRKALIDDLKILICSGLPEGYPDDLLDIQWENDHVYISEHLDLNRPVRFSEEEAAALLTGLA
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Known secondary structure (DSSP) T

SS


TTS
TTS

TT


TT



 .........430.........440.........450.........460.........470.........480.........490
Sequence XLGDLPALAGGSGSALESVTIKLTGAAGEAARLAGSVSGQSVAPEQAQAFAAITQAIREGRQLRLRYFSL
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Known secondary structure (DSSP) TS








TTT
SS




GGGT
T
 .........500.........510.........520.........530.........540.........550.........560
Sequence QRDEVTERDVDPLRLYSLDSTWYFEAYCHSKAGVRNFRLDRVESLEPNGRAVSGSATAGQDFPARLFTPG
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Known secondary structure (DSSP) TSS
TTTTTTGGG



SSSSS

B
TTTS

 .........570.........580.........590.........600.........610.........620.........630
Sequence EDDVLVCLELTRQGAGLADDYYAERTAPLPDGGLLAEVRFGDAGWLPXFVSQHGGSVRILEPESLRQETR
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Known secondary structure (DSSP) TT

STTTTTT
S
TTS
S
TTTTTSS
 .........640..
Sequence AWIDAALVQYDS
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Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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