Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6sb0N_

Fold library idPDB HeaderMoleculeTitle
c6sb0N_5.50PDB header: signaling proteinChain: N: PDB Molecule: regulatory-associated protein of mtor;


Added to library: Sat Oct 19 09:53:02 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSVALVLCLNVGVDPPDVVKTTPCARLECW
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)


SS

TT
SS
S









S
S






TT


SS



SS



SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IDPLSMGPQKALETIGANLQKQYENWQPRARYKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPR
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) S
TTTS

SSSS

SSSS
TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence PTVNGEVWVFNKNYTQYIPLSIYDLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVSMKNCIQL
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)
BTTT

TTS
S
S
SS
STTT


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPGRLNDRRTPLGELN
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) SS
TT





TTS
SS
TTSGGGTTSSS

T
SS
SS
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence WIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSYNCTPVSSPRLPPTYMHAMWQAWD
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) S
TTS
TTT


SS



STTST
 .........360.........370.........380.........390.........400.........410.........420
Sequence LAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWLTMGVENRNPPEQLPIVLQVLLSQVHRLRALDLL
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) SSSTT






ST

S

S

TTTTSSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence GRFLDLGPWAVSLALSVGIFPYVLKLLQSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLA
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) T
TTGGG


GGG
GGGTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DPYMPAEHRTMTAFILAVIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARW
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)
TTS
STT
TTTTT
S
TTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence CGVRDSAHEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVRKEL
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TGGGGG
S



S

TTSSS
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence VVALSHLVVQYESNFCTVALQFISVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYKFISATVQTGFCD
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TT


T
SS


GGG



S
 .........710.........720.........730.........740.........750.........760.........770
Sequence WSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLNRNPGVPSVVKF
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TTTTS

SS

TTT
TTST






SS


 .........780.........790.........800.........810.........820.........830.........840
Sequence HPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQDCSLLLTATDDGAIRVWKNFAD
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)
SSS


SS

SSS







SS



BTTTSS
BSSS
SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence LEKNPEMVTAWQGLSAGMVVDWEQETGLLMSSGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRS
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) SS









TTTT

SSSTTTT



S




TTTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence LIVAGLGDGSIRVYDRRMALSECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNV
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)

SSS

SSS
TTT




S




SSSS


SS



TT
SS
S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LQIVKGLTALDIHPQADLIACGSVNQFTAIYNSSGELINNIKYAISCLAFHPHWPHLAVGSNDYYISVYS
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)



SS




SSS




TTS


SS








SSS


SSS
 ..
Sequence VE
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D