Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6s62A_

Fold library idPDB HeaderMoleculeTitle
c6s62A_2.36PDB header: isomeraseChain: A: PDB Molecule: propionate catabolic protein prpd;


Added to library: Sat Oct 17 08:50:19 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RPDYDAVLQDIADYVLDYRIDSTEALDTARNCLMDTLGCGLLALRFPECTKHLGPLVEGTLVPHGARVPG
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)









TT
TT
S
SSTT


TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TSFRLDPVKAAWDIGCIVRWLDYNDTWLAAEWGHPSDNLGGILAVADHLSQKRLANGEAPLSMRQVLEAM
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S


TS
S
BSSS
GGGGTT



B
 .........150.........160.........170.........180.........190.........200.........210
Sequence IMAHEIQGVIALENSFNRVGLDHVLLVKVASTAVCAKLMGADREQLLAALSHAFVDGQALRTYRHAPNAG
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)

SGGGTB
TT

S


B
GGGSTTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence SRKSWAAGDATSRGVRLADIALRGEMGIPGVLSAPQWGFYDVLFSHTSKDLATKPEDKRRFSFPQGYGSY
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) TTT



TTTTT
TTTSSSB
TTT

B

GGGSS


SS
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VMENVLFKISFPAEFHAQTAAEAAVRLHPLVKDRLQRISRIVITTHESAIRIISKVGPLANPADRDHCLQ
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) T
B


SSSS
GGGTSTTSSS



S


ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence YMTAVPLIFGDLVAEHYEDAFHAAHPLIDRLREKMEIVEEPRYSREYLEADKRSIANAVEVFFDDGSSTG
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) S


GGGSST
ST
S
TTT



TTS
B

 .........430.........440.........450.........460.........470.........480.....
Sequence QVAVEYPLGHRRRRAEGIPLLQEKFKANLATRFPPQRCQRIFDLCSHQASLEATPVNRFMDLLAI
Predicted secondary structure



























SS confidence
































































Known secondary structure (DSSP)

S
TTSGGGTTS

SB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D