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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6s4mA_

Fold library idPDB HeaderMoleculeTitle
c6s4mA_2.40PDB header: transport proteinChain: A: PDB Molecule: major facilitator superfamily domain-containing protein 10;


Added to library: Sat May 16 09:21:30 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QPPERRVVTVVFLGLLLDLLAFTLLLPLLPGLLESHGRAHDPLYGSWQGGVDWFATAIGMPVEKRYNSVL
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Known secondary structure (DSSP)

TTGGGTTT
T



 .........80.........90.........100.........110.........120.........130.........140
Sequence FGGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGVATSYAVWATSRSFAAFLASRLIGGISKGNV
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Known secondary structure (DSSP)


STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLSTAIVADLGSPLARSQGMAVIGVAFSLGFTLGPMLGASLPLEMAPWFALLFAASDLLFIFCFLPETLP
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Known secondary structure (DSSP) TSSSS
GGG


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LEKRAPSIALGFRDAADLLSPLALLRFSAVARGQDPPSGDRLSSLRRLGLVYFLYLFLFSGLEYTLSFLT
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Known secondary structure (DSSP) GGGS
S
S
SSTT
TTTSSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence HQRFQFSSLQQGKMFFLIGLTMATIQGAYARRIHPGGEVAAVKRALLLLVPAFLLIGWGRSLPVLGLGLL
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Known secondary structure (DSSP)


TGGGS
TT


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LYSFAAAVVVPCLSSVVAGYGSPGQKGTVMGTLRSLGALARAAGPLVAASVYWLAGAQACFTTWSGLFLL
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Known secondary structure (DSSP) TSS
GGG
T
 ......
Sequence PFFLLQ
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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