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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6s20C_

Fold library idPDB HeaderMoleculeTitle
c6s20C_1.98PDB header: hydrolaseChain: C: PDB Molecule: n-acetylgalactosamine-6-o-sulfatase;


Added to library: Sat Feb 8 09:04:30 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQKPNIIYIFADDLGIGDLSCYGATKVSTPHIDRLAGQGVQFTNAYATSATSTPSRFGLLTGMYPWRQEN
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Known secondary structure (DSSP)

S
SS

TTSSGGGT
SSS

SSS
SBSSSS
GGGSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TGIAPGNSELIIDTACVTMADMLKEAGYATGVVGKWHLGLGPKGGTDFNGHITPNAQSIGFDYEFVIPAT
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Known secondary structure (DSSP)
SS

TT


SS
TTS

TT


S

SSTT


TTS


S
GGGGT
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VDRVPCVFVENGHVVGLDPNDPITVNYEHKVGDWPTGEENPELVKLKPSQGHNNTIINGIPRIGWMTGGK
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Known secondary structure (DSSP) TTBS



TTTT

TTS

SSS

SS

BTTT
GGG
SS
BSSS

SBTT
BSS
G
 .........220.........230.........240.........250.........260.........270.........280
Sequence SALWKDEDIADIITNKAKSFIVSHKEEPFFLYMGTQDVHVPRVPHPRFAGKSGLGTRGDVILQLDWTIGE
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Known secondary structure (DSSP) GG


GGGTTTS


TTSSS



TTTTTSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IMNTLDSLQLTDNTILIFTSDNGPVIDDGYQDQAFERLNGHTPMGIYRGGKYSAYEAGTRIPFIVRWPAK
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Known secondary structure (DSSP) TT
STTSS


S
SSB


TTTT
TT

TTTT
S

TT
SSGGGTB


TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VKPNKQQALFSQIDIFASLAALLKQPLPEDAAPDSQEHLNTLLGKDYTSREYIVQQNLNNTLAIVKGQWK
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Known secondary structure (DSSP)



S
GGGTT



TTSSTT



TTS




S

TT

TT
 .........430.........440.........450.........460.........470.........480
Sequence YIEPSDAPAIEYWTKMELGNDRHPQLYDLSADPSEKNNVAKQHPEVVRELSELLESVKTR
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Known secondary structure (DSSP)



S
SB
TTT

B



SS
TTT
TT




TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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