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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6rwbE_

Fold library idPDB HeaderMoleculeTitle
c6rwbE_3.25PDB header: toxinChain: E: PDB Molecule: toxin,toxin complex subunit tcab,putative toxin subunit,


Added to library: Sat Oct 26 08:42:54 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APKILQPEARTDLSLAEGIPERANEYADPASIQSLFSPGRYLCELYHVAKELHEDGNKLHIDKRRPDLQD
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Known secondary structure (DSSP)

S
SS

SSS


S



SSSTTSSSSTTSS
TTSSSS
TTGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LVLNNSNMNQEVSSLEILLNVLQTKTPLDELTKDTEAHANDSSFTLPYDDNLTVINAILEDKAISLREIA
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Known secondary structure (DSSP)

B



BTTSS
T

S

S

GGG

S

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VLLTEESDFSPTPALVQEQLGLNPASYALIDIKSPLDESYAKRLAHATQLSVEQLQWLNKNAIENSSNKN
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Known secondary structure (DSSP) TT
SSSS



TTTTT

TTTTTT



SS

SSTT

TSS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DPAKLEILAVISEYRRLHQRYGLSVDPFIAIINAVNTTHTNENKTSFFQQIFSTLDVDAGFNFLDQGSWE
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Known secondary structure (DSSP)


S


S






SSSS

SSS

SS
TTT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VIIRKALGITAEELLRIAKYCFGKSSISNVKMNSKKFSQLYRMAMIPRTLGVSFSQAEYLWQLYSHSDEN
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Known secondary structure (DSSP)


TTTTTTSSSS
TTTT

SS
SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence IMEKIAQGNALTIIDAIIVLENTLQWMSEQKLDITTLQAMLTKQYSTTATPELFNFLSNIYQTLGKQVYS
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Known secondary structure (DSSP) S

TT










TS
S



 .........430.........440.........450.........460.........470.........480.........490
Sequence ESLKPNLYRSLANGFHLKANVVAGLVNWLAKNDSEFTLERFWQNISMTFAEEPSLHQLEVHQPLLIQCQK
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Known secondary structure (DSSP) SSTT

TTSSTT

SS
SS

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence LSQYVLIAQWAELSEQEIALILLPNGIDNRGSAPSPSITLLKLLSEFKLCQQEAKVSQSELFDIMQQLIT
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Known secondary structure (DSSP) TT

TSSSTTSSSSSS

SSS
S
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence DTNEKQEKLRNSADKVIRSIAKSIGSINNSMDDIDSTISIRNGSATLFPPEHPMYKALKLEVSNLEKSKI
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Known secondary structure (DSSP)
SST



S





TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence QLEGKKKEEEIKLEQAKDNIQSLINNWDSEIIIRLADAYHWDINIANSMFILIFGEKINFTFHYENRNDY
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Known secondary structure (DSSP) TT




SSTT

TTTS


SS
TTTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence HYEEHYGYRFEQKPMYSFDKKLTNGFGSILLLKNHIYIAEKLKIHPGTIIKIKNYIFDDKSNELENIANK
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Known secondary structure (DSSP)


SSS



SS





SSS
TTTT

T


S
 .........780.........790.........800.........810.........820.........830.........840
Sequence LRVNLGSPTSTVLNKINESRRDALVNYYLAKNVSGDEKIKTAEQLYQYLLLDTKIGHEVKTSPIAEAISS
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Known secondary structure (DSSP) SSSSSS
SSSSSSS
TTS


S
S
TT

SS
B

 .........850.........860.........870.........880.........890.........900.........910
Sequence LQIYINRCVDGEENDLHEKNISTHFSSDNFLHGWNSYNKRYARWAGKEKLMYYAADYIDPTLRYNKTELF
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Known secondary structure (DSSP) TT

SS

TSSSSTTTT




TSTT
SSTT

SSS
SS

 .........920.........930.........940.........950.........960.........970.........980
Sequence NTFEQSINNSRLTEKSVKSALQSYLISYEKLAQIDTIKELYVENIKTHFFLGKTRESPCQYYWRSGEQLS
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Known secondary structure (DSSP) TTS

SS

TT
TTTT
SSSS



S
T
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence NDSHHLRWSEWKKVECNINGTEEKFFINLSWYRNRLYVDWLNKTAFKTDEGKGKSEYHYNAAYKNDNNAW
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Known secondary structure (DSSP) TSSS








SSS
SS


S
TT





SSSSSSS


TTS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence NDNISNMKIGLPWEQSKDIDEIPPIFINQDNVGGNSFNRITFDTNIIHELDGDISLLPPDSLPLVEKLQT
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Known secondary structure (DSSP)
SS
S

SSSS
S

S





SS













S




TTT




SSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence SVDELLSYSTQKDKIGLDAFSGSYGIYFWEFFFHIPFLASMRFLNEQRFDLAQHWLKYLLNSAGYRDRNG
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Known secondary structure (DSSP)
STTTSSSSS
STTTSSTTTT
TTTB
SS


TTSS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence NLLKEGDNILYWNSLPLQQDTDWDKNTLTLPTDDPDVIAMQDPMQYKLAIFMRTLDLIISQGDQAYRQLE
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Known secondary structure (DSSP)



SSS



B
SSTTTS









SS


STTTTT

 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence RDTLAEAKIYYIQASQLLGSRPDLNRGHQWENIKLAEESRQAENGHFLPPYNEILLSYWDKLEIRLYNLR
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Known secondary structure (DSSP)
S



S
SS



B
SSS

SSS
SSSS




ST
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence HNLNLDGQPLHLPLFATPVDPKALQRQHGAGNGINSGEQMATAQTSLYRFPLLIERAKSAVSSVIQFGNS
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Known secondary structure (DSSP) TTB
TTS
BSS

















TT














SB
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence LQSVLERQDNEAMTLLFQQQQQKVLQHTKDIQNNNIQVLQANLEATNSLKSAAKQRSKHYKELLDNGISS
Predicted secondary structure



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Known secondary structure (DSSP)
S
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence REQSGLDLRIDAGAVNIASVAPLMLAAALDTAPNVFGLADGGSHWGAVPYATSATLQISAGLTESRANIN
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Known secondary structure (DSSP) TTTSTS



SS





TT
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence DIKANYDRREQEWTLQKNQADKDAEQLAHQYTSVQEQLNMAQKQRNLAELEQGHADALYQMQSTRFTGKE
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Known secondary structure (DSSP) S
TTS
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence LYNWMAGRLSGLYFQLFDATQPLCLMAKAVLEKEVDKAKTDGLFIRSGWNDLYQGLLAGEDLQLNLQKLE
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Known secondary structure (DSSP) S
TTSSSSSSSS



TTTTSTT
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence NVWLMEEQRALEVERTVSLAQHYQQLSDHKFNLAEIVTGYMAQDKDQKTGNEQDFVELKNSTLIASLSIK
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Known secondary structure (DSSP) S





S

TTTSTTTS


TSS
S

S
SSS
SSS
SG
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence GLNLVEDYPETMHLGDIRRIKQISVSLPALLGPYQDVQATLDYAGENTHLAKGCTALAISRGMNDSGQFQ
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Known secondary structure (DSSP) GG

TTSS
TTS


SB





TTT




B
S

S


SSTT

SSSSB
SSTT
 .........1830.........1840.........1850.........1860.........1870...
Sequence LDFNDGKYLPFEGIDISDKGTLVLRFPNATSKQKLLLQSLSDIILHIRYTIRS
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Known secondary structure (DSSP)

SSSSB

TTTT
BSS
S


TTTTTTTTSSS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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