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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6rw8B_

Fold library idPDB HeaderMoleculeTitle
c6rw8B_2.84PDB header: toxinChain: B: PDB Molecule: a component of insecticidal toxin complex (tc);


Added to library: Sat Oct 26 08:43:42 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LLLTNISFMSFSEFRHRTSGTLTWRETDFLYQQAHQESKQNKLEELRILSRANPQLANITNLNITPSTLN
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Known secondary structure (DSSP)

S
STTTS
STTS
GGGTS
SS





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NSYNSWFYGRAHRFVKPGSIASIFSPAAYLTELYREAKDFHPDNSQYHLNKRRPDIASLALTQNNMDEEI
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Known secondary structure (DSSP) TTTGGG

B
TT
TTBTTSTTSS
TTSTTS
T
B




 .........150.........160.........170.........180.........190.........200.........210
Sequence STLSLSNELLLHNIQTLEKTDYNGVMKMLSTYRQTGMTPYHLPYESARQAILLQDKNLTAFSRNTDVAEL
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Known secondary structure (DSSP) BTTTS
TT

SSSS



SGGG
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence MDPTSLLAIKTDISPELYQILVEEITPENSTELMKKNFGTDDVLIFKSYASLARYYDLSYDELSLFVNLS
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Known secondary structure (DSSP) S
TT





TTTTSS
SS
SS
ST

TTT


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence FGKKNTNQQYKNEQLITLVNDGNDTATARLIKRTRKDFYDSHLNYAELIPIKENEYKYNFSVKKTEPDHL
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Known secondary structure (DSSP)
S
TT
S


BTT
S
STT





TTTTSS

TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DFRLQNGDKEYIYQDKNFVPIANTHYSIPIKLTTEQITNGITLRLWRVKPNPSDAINANAHFKMMEFPGD
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Known secondary structure (DSSP) SSS
S



TT



S

SSSS


 .........430.........440.........450.........460.........470.........480.........490
Sequence IFLLKLNKAIRLYKATGISPEDIWQVIESIYDDLTIDSNVLGKLFYVQYYMQHYNISVSDALVLCHSDIS
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Known secondary structure (DSSP)



SS



SS

TT



 .........500.........510.........520.........530.........540.........550.........560
Sequence QYSTKQQPSHFTMLFNTPLLNGQEFSADNTKLDLTPGESKNHFYLGIMKRAFRVNDTELYTLWKLANGGT
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Known secondary structure (DSSP)



SSS

SSS
SSSS







B

STTS


T

TTTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence NPEFMCSIENLSLLYRVRLLADIHHLTVNELSMLLSVSPYVNTKIALFSDTALTQLISFLFQCTQWLTTQ
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Known secondary structure (DSSP)


B


TTT

SSS
SS

GGG

 .........640.........650.........660.........670.........680.........690.........700
Sequence KWSVSDVFLMTTDNYSTVLTPDIENLITTLSNGLSTLSLGDDELIRAAAPLIAASIQMDSAKTAETILLW
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Known secondary structure (DSSP) T


S






S
S


TT
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence INQIKPQGLTFDDFMIIAANRDRSENETSNMVAFCQVLGQLSLIVRNIGLSENELTLLVTKPEKFQSETT
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Known secondary structure (DSSP) TT
GGG

STTTTTTTT
S


TT


STT
GGGT
TTTS
 .........780.........790.........800.........810.........820.........830.........840
Sequence ALQHDLPTLQALTRFHAVIMRCGSYATEILTALELGALTAEQLAVALKFDAQVVTQALQQTDLGVNTFTN
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Known secondary structure (DSSP) S



GGGTT
B
TTTTT

SSS

SB
S
 .........850.........860.........870.........880.........890.........900.........910
Sequence WRTIDVTLQWLDVAATLGITPDGVAALIKLKYVGEPETPMPTFDDWQAASTLLQAGLNSQQSDQLQAWLD
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Known secondary structure (DSSP) STTS
TT
SS

TTS



TT

 .........920.........930.........940.........950.........960.........970.........980
Sequence EATTTAASAYYIKNGAPQQIKSRDELYSYLLIDNQVSAQVKTTRVAEAIASIQLYVNRALNNVEGKVSKP
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Known secondary structure (DSSP) TSS
TT

SSS
TTS
TT
B

TT
SSS

TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VKTRQFFCDWETYNRRYSTWAGVSELAYYPENYIDPTIRIGQTGMMNNLLQQLSQSQLNIDTVEDSFKNY
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Known secondary structure (DSSP) GGGST




TS
GGGT

SS

TT

T
SS


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence LTAFEDVANLQVISGYHDSINVNEGLTYLIGYSQTEPRIYYWRNVDHQKCQHGQFAANAWGEWKKIEIPI
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Known secondary structure (DSSP) T

SSSTTTS
SSSS

SSS
SSS


TTTB



SS

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence NVWQENIRPVIYKSRLYLLWLEQKELKNESEDGKIDITDYILKLSHIRYDGSWSSPFNFNVTDKIENLIN
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Known secondary structure (DSSP)

STT
TT


STT

B
TTS
B



 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence KKASIGMYCSSDYEKDVIIVYFHEKKDNYSFNSLPAREGMTINPDMTLSILTENDLDAIVKSTLSELDTR
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Known secondary structure (DSSP) SS

BSSSS


S


SSS



SSS



TSGGG


S
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence TEYKVNNQFATDYLAEYKESITTKNKLASFTGNIFDLSYISPGNGHINLTFNPSMEINFDKNISFLLKNG
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Known secondary structure (DSSP) S
B

B
SS
S



SS
B






SSS




S
SS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence SDILVELNAEDHVASKPSHESDPMVYDFNQVKVDIEGYDIPLVSEFIIKQDIVIESPIHIKLKSKDTSNV
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Known secondary structure (DSSP) S
SSSS
SS


TT
S




SS







SGGGS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence ISLHKMPSGTQYMQIGPYRTRLNTLFSRKLAERANIGIDNVLSMETQNLPEPQLGEGFYATFKLPPYNKE
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Known secondary structure (DSSP)
TTS
TT





TST




SSS




SS
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence EHGDERWFKIHIGNIDGNSARQPYYEGMLSDIETTVTLFVPYAKGYYIREGVRLGVGYKKIIYDKSWESA
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Known secondary structure (DSSP) SS
SS
BSSSS

S


SS



SS


SSS
B




SS



SSS
S
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence FFYFDETKNQFIFINDADHDSGMTQQGIVKNIKKYKGFIHVVVMKNNTEPMDFNGANAIYFWELFYYTPM
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Known secondary structure (DSSP)
TTTT

TTT

SSS




S
S
SS





TTSTTT
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence MVFQRLLQEQNFTESTRWLRYIWNPAGYSVQGEMQDYYWNVRPLEEDTSWNANPLDSVDPDAVAQHDPMH
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Known secondary structure (DSSP) TT
TTB
TT

TT
S
SBSSTT



SSTTSS

ST
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence YKVATFMKMLDLLITRGDSAYRQLERDTLNEAKMWYVQALTLLGDEPYFSLDNDWSEPRLEEAASQTMRH
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Known secondary structure (DSSP) TS






SSS






BT
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence HYQHKMLQLRQRAALPTKRTANSLTALFLPQINKKLQGYWQTLTQRLYNLRHNLTIDGQPLSLSLYATPA
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Known secondary structure (DSSP) T










TTTT

B
B

TTTB
SSS
BSS







 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence DPSMLLSAAITASQGGGDLPHAVMPMYRFPVILENAKWGVSQLIQFGNTLLSITERQDAEALAEILQTQG
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Known secondary structure (DSSP)














B








SB
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence SELALQSIKMQDKVMAEIDADKLALQESRHGAQSRFDSFNTLYDEDVNAGEKQAMDLYLSSSVLSTSGTA
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Known secondary structure (DSSP)
SS
TT
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence LHMAAAAADLVPNIYGFAVGGSRFGALFNASAIGIEISASATRIAADKISQSEIYRRRRQEWEIQRNNAE
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Known secondary structure (DSSP) TTS



SSS




TT
 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence AEIKQIDAQLATLAVRREAAVLQKNYLETQQAQTQAQLAFLQSKFSNAALYNWLRGRLSAIYYQFYDLAV
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Known secondary structure (DSSP) STTS
 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence SLCLMAEQTYQYELNNAAAHFIKPGAWHGTYAGLLAGETLMLNLAQMEKSYLEKDERALEVTRTVSLAEV
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Known secondary structure (DSSP) TT
TT


S
S


BGGGTTTT




 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence YAGLTENSFILKDKVTELVNAGEGSAGTTLNGLNVEGTQLQASLKLSDLNIATDYPDGLGNTRRIKQISV
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Known secondary structure (DSSP) T
SSS


STT
SSTTSS
SS

BGGGTTGGGSS
GGG
S
 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence TLPALLGPYQDVRAILSYGGSTMMPRGCKAIAISHGMNDSGQFQMDFNDAKYLPFEGLPVADTGTLTLSF
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Known secondary structure (DSSP)





TT



SS



SGGGSS
SSB
S
SS

TT
SB

TTTTTT
S
 .........2320.........2330.......
Sequence PGISGKQKSLLLSLSDIILHIRYTIRS
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Known secondary structure (DSSP)
TTTTTT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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