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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6roiA_

Fold library idPDB HeaderMoleculeTitle
c6roiA_3.70PDB header: lipid transportChain: A: PDB Molecule: probable phospholipid-transporting atpase drs2;


Added to library: Sat Jul 6 10:25:42 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PRVIHINDSLANSSFGYSDNHISTTKYNFATFLPKFLFQEFSKYANLFFLCTSAIQQVPHVSPTNRYTTI
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Known secondary structure (DSSP)

SS
SSGGGTT



S



SSS
STTSSSTTSTT

SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GTLLVVLIVSAMKECIEDIKRANSDKELNNSTAEIFSEAHDDFVEKRWIDIRVGDIIRVKSEEPIPADTI
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Known secondary structure (DSSP) TTTTT
TTTTSTT

TT

TT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ILSSSEPEGLCYIETANLDGETNLKIKQSRVETAKFIDVKTLKNMNGKVVSEQPNSSLYTYEGTMTLNDR
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Known secondary structure (DSSP) SSTTS


TTTSS

S



STTSS


SSTTTT








TT



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QIPLSPDQMILRGATLRNTAWIFGLVIFTGHETKLLRNATATPIKRTAVEKIINRQIIALFTVLIVLILI
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Known secondary structure (DSSP)

GGG
SS
S
S



TTSSSSSSS

S





SSTTTSTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SSIGNVIMSTADAKHLSYLYLEGTNKAGLFFKDFLTFWILFSNLVPISLFVTVELIKYYQAFMIGSDLDL
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Known secondary structure (DSSP) TTTT
GGGT




TTTTTTTTTTTTTSS
TTTTTTTTT
GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence YYEKTDTPTVVRTSSLVEELGQIEYIFSKTGTLTRNIMEFKSCSIAGHCYIDKIPEDKTATVEDGIEVGY
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Known secondary structure (DSSP) TTTT
SSTTTTGGGGS



BTTTTTSS

SS





SSS



 .........430.........440.........450.........460.........470.........480.........490
Sequence RKFDDLKKKLNDPSDEDSPIINDFLTLLATCHTVIPEFQSDGSIKYQAASPDEGALVQGGADLGYKFIIR
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Known secondary structure (DSSP)


TTSSSTSS


SSS

SSTTGGGS
B


B
 .........500.........510.........520.........530.........540.........550.........560
Sequence KPNSVTVLLEETGEEKEYQLLNICEFNSTRKRMSAIFRFPDGSIKLFCKGADTVILERLDDEANQYVEAT
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Known secondary structure (DSSP)
SS

B
TTT

B





TTT

TTS

TTS

TTT


 .........570.........580.........590.........600.........610.........620.........630
Sequence MRHLEDYASEGLRTLCLAMRDISEGEYEEWNSIYNEAATTLDNRAEKLDEAANLIEKNLILIGATAIEDK
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Known secondary structure (DSSP) T


TTS
STTTTSSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LQDGVPETIHTLQEAGIKIWVLTGDRQETAINIGMSCRLLSEDMNLLIINEETRDDTERNLLEKINALNE
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Known secondary structure (DSSP)
TTTT

SS
TTSS
SS


SSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence HQLSTHDMNTLALVIDGKSLGFALEPELEDYLLTVAKLCKAVICCRVSPLQKALVVKMVKRKSSSLLLAI
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Known secondary structure (DSSP) S


TTTTSSSTTSTTSSS

TTTTTTSS


 .........780.........790.........800.........810.........820.........830.........840
Sequence GDGANDVSMIQAAHVGVGISGMEGMQAARSADIAVGQFKFLKKLLLVHGSWSYQRISVAILYSFYKNTAL
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Known secondary structure (DSSP)
STTSTTSS

SS

S
SSSGGGTTTTTTTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence YMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIGVFDQFVSSRLLERYPQLYKLGQKGQFFSVY
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Known secondary structure (DSSP) TTTTTTTTTTTTS



SS
T




TSS

SS

GGGGTSSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence IFWGWIINGFFHSAIVFIGTILIYRYGFALNMHGELADHWSWGVTVYTTSVIIVLGKAALVTNQWTKFTL
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Known secondary structure (DSSP) TTTTTTTSSSSSTT

STT



S




TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence IAIPGSLLFWLIFFPIYASIFPHANISREYYGVVKHTYGSGVFWLTLIVLPIFALVRDFLWKYYKRMYEP
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Known secondary structure (DSSP) TTTTGGGGTSS
S
SSTSTS
 .........1060.........1070.........1080.........1090.........1100.......
Sequence ETYHVIQEMQKYNVQRMKKQRGFAFSQAEEGGQEKIVRMYDTTQKRGKYGELQDASA
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Known secondary structure (DSSP)
TT



SSS


B




S
S
TTTTTTS

SSS


SSSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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