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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ro4A_

Fold library idPDB HeaderMoleculeTitle
c6ro4A_3.50PDB header: translocaseChain: A: PDB Molecule: general transcription and dna repair factor iih helicase


Added to library: Sat Jul 6 10:15:21 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYL
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Known secondary structure (DSSP)

SS


B
SSS
TTSTTSTTT


SS

TT

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence RKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESCHPDVIQHLLQDPVIRECRLQTVSFEVKQEM
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Known secondary structure (DSSP) GGG
SS


SSSTTTTSTTS
SS
S
TTTTT
TTTTTSB



STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGK
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Known secondary structure (DSSP) STT





B

SS
SSS







TT



TTS
SSSB




TTSST
 .........220.........230.........240.........250.........260.........270.........280
Sequence SLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHT
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Known secondary structure (DSSP) T
S

SSTTS


TTT
SSS




SS
S

TTTSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence TKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGP
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Known secondary structure (DSSP) S


TTS
BS
SGGGTTSTTTSSS
BS
S



TTS
SSTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence KLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRND
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Known secondary structure (DSSP)

TTTTSS

B




TTTT

SSTTTS
TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQI
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Known secondary structure (DSSP)


B
STTTTT


SSS
SS
SS




SS
SSS





S
 .........500.........510.........520.........530.........540.........550.........560
Sequence SSHGGSRRQEAQRLGRVLRYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFST
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Known secondary structure (DSSP) S

SS
TTGGGTST


BTTSTSSTTTTTTT


SS
TT
SSS

S

S
 .........570.....
Sequence KEEQQQLLQKVLAAT
Predicted secondary structure

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Known secondary structure (DSSP) STTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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