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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6rmgA_

Fold library idPDB HeaderMoleculeTitle
c6rmgA_3.40PDB header: membrane proteinChain: A: PDB Molecule: protein patched homolog 1,gfp-like fluorescent


Added to library: Sat Oct 12 08:53:45 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRDYLHRPSYCDAAFALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVG
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Known secondary structure (DSSP)


TTTS
TS
B

SSSSS
GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQA
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Known secondary structure (DSSP) GGG

B


SS
SSSTSSS
S

SSS




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLR
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Known secondary structure (DSSP) S

B
SSSS
B
B







SSS





GGGSSGGGGGG






SSSSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence WTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNG
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Known secondary structure (DSSP) GGG

TT


TT
SSS

S
TTSTT

SS
TTSS

S


TTTTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAI
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Known secondary structure (DSSP)
S
SSS
S
GGG
S

SSS
SSSTTS


 .........360.........370.........380.........390.........400.........410.........420
Sequence LEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKS
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Known secondary structure (DSSP) TTS
TTSS

TTT




SSTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence QGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFED
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Known secondary structure (DSSP)
SS

B
SSSTTTGGGTTSSS
SSTTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence RTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRRED
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Known secondary structure (DSSP) TSTTTT
SS
TTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence RRLDIFCCKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDF
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Known secondary structure (DSSP) T

TTS




TTSSS

B


TTTTS
SSSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence IAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFD
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Known secondary structure (DSSP) T


S

GGGSGGGSSSS


SSS




 .........710.........720.........730.........740.........750.........760.........770
Sequence SDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQRLVDADGIINPSAFYIYLTAWVSND
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Known secondary structure (DSSP) TTTS
SSS


TT
SSTB


SSS
B
GGGTTT

SB
GGG
B
STT
 .........780.........790.........800.........810.........820.........830.........840
Sequence PVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSN
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Known secondary structure (DSSP) TT



S







S


STTTSS










S

S
 .........850.........860.........870.........880.........890.........900.........910
Sequence YTSLGLSSYPNGYPFLFWEQYIGLRHWLLLFISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGM
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Known secondary structure (DSSP) T
SGGGTTSSS
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence MGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLML
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Known secondary structure (DSSP) T

B
STTTT

S
TTSGGG
 .........990.........1000.........1010.........1020......
Sequence AGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSP
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Known secondary structure (DSSP) TT
S
SSSTTTTTTS



S
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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