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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6rkwD_

Fold library idPDB HeaderMoleculeTitle
c6rkwD_6.60PDB header: isomeraseChain: D: PDB Molecule: dna gyrase subunit b;


Added to library: Sat Nov 9 08:32:45 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSV
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Known secondary structure (DSSP)



SGGG




TT



SSSSTTS



TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIH
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Known secondary structure (DSSP)
SS



SB
TTTSSBSTT

S
SSTTT
SS
S

SS
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDG
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Known secondary structure (DSSP) TTSS


SS

TTT

S

S

TSTT
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTH
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Known secondary structure (DSSP)



STTTS
BS
S



TTBSS

SS
B
TT
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence LAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQ
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Known secondary structure (DSSP) TS




TTT
SS

BSSTT

SB

 .........360.........370.........380.........390.........400.........410.........420
Sequence QMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSELY
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Known secondary structure (DSSP)
TT




SS
SS
B

S

SSSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALYNPDKLRYHSIIIMTDA
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Known secondary structure (DSSP) S
SSS
S



SSSS

SS

S





TTT



S



S
 .........500.........510.........520.........530.........540.........550.........560
Sequence DVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATLHTN
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Known secondary structure (DSSP) S
TT





TT
STSS


S
 .........570.........580.........590.........600.........610.........620.........630
Sequence ASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELND
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Known secondary structure (DSSP) SS
SSSTTTS
TTTS



GGGGS
 .........640.........650.........660.........670.........680.........690.........700
Sequence KEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIER
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Known secondary structure (DSSP)

SS


SSS



SS


STS

SS

S
 .........710.........720.........730.........740.........750.........760.........770
Sequence GERRQPVASFEQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTT
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Known secondary structure (DSSP) SS
B


S
TSS


SGGGS
TS
TTT



B






TTTTTTT
 .........780.
Sequence LMGDAVEPRRA
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Known secondary structure (DSSP) SSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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