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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6rkoB_

Fold library idPDB HeaderMoleculeTitle
c6rkoB_2.68PDB header: membrane proteinChain: B: PDB Molecule: cytochrome bd-i ubiquinol oxidase subunit 2;


Added to library: Sat Oct 19 09:42:46 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLITAGGAL
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Known secondary structure (DSSP)

TTTTS
SSTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNL
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Known secondary structure (DSSP)
TTTTTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence LQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVT
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Known secondary structure (DSSP) TT
B

TT




GGGS
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence LVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTIL
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Known secondary structure (DSSP) TT

S


TTS


TTS

TGGGSGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence TARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPII
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Known secondary structure (DSSP) TT
TT
BSSS
SS
TTTSS

 .........360.........370........
Sequence LLYTAWCYWKMFGRITKEDIERNTHSLY
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Known secondary structure (DSSP) S
S


TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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