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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6rkoA_

Fold library idPDB HeaderMoleculeTitle
c6rkoA_2.68PDB header: membrane proteinChain: A: PDB Molecule: cytochrome bd-i ubiquinol oxidase subunit 1;


Added to library: Sat Oct 19 08:37:58 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGL
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Known secondary structure (DSSP)

TTT

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence TMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSA
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Known secondary structure (DSSP) S
T
TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGR
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Known secondary structure (DSSP) S

STTTTS
T
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DFAFAKRSFAIAASFGMAAVLSVIVLGDQKTKLAAIEMVQHEERIRNGMKAYSLLEQLRSVRDQFNSMKK
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Known secondary structure (DSSP)
S






TTGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence DLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEK
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Known secondary structure (DSSP) GGGGTTT
SSGGG

TTS

TT
TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence KWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAE
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Known secondary structure (DSSP) TSTTTTTTTTS
S

 .........430.........440....
Sequence LFLMFKFARLGPSSLKTGRYHFEQ
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Known secondary structure (DSSP) GGGGG

S
SGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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