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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6rfsB_

Fold library idPDB HeaderMoleculeTitle
c6rfsB_4.04PDB header: oxidoreductaseChain: B: PDB Molecule: subunit nubm of nadh:ubiquinone oxidoreductase (complex i);


Added to library: Sat Dec 14 08:47:00 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RQYGGLKDQDRIFQNLYDNYGWDLASARKQGDWYKTKELILKGDTWIIDEIKKSGLRGRGGAGFPSGLKW
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Known secondary structure (DSSP)






GGG
S


TTSSS
SSTTTSSS
T


SSSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence SFMNPPGWEKNEGPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLLAGRAMNATAAYIYIRGEFYNEA
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Known secondary structure (DSSP) TT

TTSGGG
S





TT

TT
TTTT
STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVLQTAINEAYAAGLIGKDACGSGYDFDVYIHRGMGAYVCGEETSLIESLEGKAGKPRLKPPFPAGVGLF
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Known secondary structure (DSSP) TTSSBSSSTTSS

BSS
GGGGSTTS





SSS
TTTS
BT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GRPSTVTNVETVAVAPTILRRGGDWFASFGRERNSGTKLFCISGNVNEPCTVEEEMSIPLRELLEKHCGG
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Known secondary structure (DSSP) TB
SS
TSSBSSSSBSSBSS
SS
BS

 .........290.........300.........310.........320.........330.........340.........350
Sequence IKGGWDNLLGVIPGGCSVPILPKNICEDVLMDFDALKDVQSGLGTAAVIVINKQQDVIRAIQRFAAFYKH
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Known secondary structure (DSSP) BTTTTTSSSSSS

B
TS
BSSSTT


TT

TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ESCGQCTPCREGTTWLLKAMDRFRTGQAKEREIDMLYELTKDIEGHTICALGDAAAWPIQGLIRNFRPEM
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Known secondary structure (DSSP) T

SS
T
S
TTT

SST
 .........430.........440.........450......
Sequence ETRMKKFHDEVGAVSVGGWMKDARVEKGKVVGAPLP
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Known secondary structure (DSSP) SS
B
GGG
BTT

SSSSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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