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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6re7U_

Fold library idPDB HeaderMoleculeTitle
c6re7U_3.10PDB header: proton transportChain: U: PDB Molecule: atp synthase subunit alpha;


Added to library: Sat Jul 6 09:38:20 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADAKALDELRKPKFSSKYLIQHVSQKLIPAVKEWEKSYQPPVIHLGRVLSVGDGIARVYGLKSVQAGELV
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Known secondary structure (DSSP) -

TTTGGGSS


S

TTTTSTTS



SSSTT
TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence CFDSGVKGMALNLQADHVGVVVFGNDSVIHQGDLVYRTGQIVNVPIGPGTLGRVTDGLGQPIDGKGPLTN
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Known secondary structure (DSSP) TTS

SS
SS
GGG

TT

SGGGTT

TTS
B
SSS



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VRSSLVEVKAPGIIARQSVREPLFTGVKAVDALVPIGRGQRELIIGDRQTGKTAVAIDAIIHQKNCNEQV
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Known secondary structure (DSSP)
S





STTB



SB


S
TS

BTT



TTSSTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PKAQRVYCVYVAVGQKRSTVAQLVKLFTQTGAMRYTIMVSATASDAAPLQFLAPYSGCAMAEYFRDTGKH
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Known secondary structure (DSSP)
SSS
S

TGGGT
TTS
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GLIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSKELGGGSLTAFPVIETQAGD
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Known secondary structure (DSSP) TTT



GGG

TTTT

BB
TTTTS

BTTB
 .........360.........370.........380.........390.........400.........410.........420
Sequence VSAYIATNVISITDGQIFLETELFYKGIRPALNVGLSVSRVGSAAQFPGMKQVAGTLKLELAQYREVAAF
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Known secondary structure (DSSP) TTSSSB
STTTTTT
SS
B
TTT

BSS
TT
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence AQFGSDLDAATQYVLERGARLTEMLKQKQFAPIPIERQTVAVYAATKGFLDKVRVQDIVAAEEAVISQVN
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Known secondary structure (DSSP)
S

SS




TT



SSS
SSS
STTS
 .........500.........510.........520...
Sequence PAVFKILKANGKITPALDAHLKAELRKVKLPGA
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Known secondary structure (DSSP) TSS

TTSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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