Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6rbfC_

Fold library idPDB HeaderMoleculeTitle
c6rbfC_2.70PDB header: antimicrobial proteinChain: C: PDB Molecule: mucin-2;


Added to library: Sat Aug 17 08:28:57 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APGTCSIYGSGHYITFDGKYYDFDGHCSYVAVQDYCGQNSSLGSFSIITENVPCGTTGVTCSKAIKIFMG
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)

TTT
TT




SS

SSSTT

S
SSSS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence RTELKLEDKHRVVIQRHVAYTTREVGQYLVVESSTGIIVIWDKRTTVFIKLAPSYKGTVCGLCGNFDHRS
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TTT



TTTTT
SSS

GGGTTS
BSTT


SS
G
 .........150.........160.........170.........180.........190.........200.........210
Sequence NNDFTTRDHMVVSSELDFGNSWKEAPTCPDVSTNPEPCSLNPHRRSWAEKQCSILKSSVFSICHSKVDPK
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP) GGS
B
TTS
B
S
TTBS
TTS


SS


SGGGGGGGGSGGGTTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence PFYEACVHDSCSCDTGGDCECFCSAVASYAQECTKEGACVFWRTPDLCPIFCDYYNPPHECEWHYEPCGN
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)

SS
TT





BTTBS



GGGS
TT


SS

 .........290.........300.........310.........320.........330.........340.
Sequence RSFETCRTINNISVSYLEGCYPRCPKDRPIYEEDLKKCVTADKCGCYVEDTHYPPGASVPT
Predicted secondary structure









































SS confidence




























































Known secondary structure (DSSP) TT

BTTTT




TT




SSS

TTT


TTTT
TT
SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D