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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6raoJ_

Fold library idPDB HeaderMoleculeTitle
c6raoJ_3.10PDB header: virus like particleChain: J: PDB Molecule: afp12;


Added to library: Sat Apr 20 08:25:49 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ENALFPAVKDAIVFDALWQQAHEKVTALSGEIWTDTGDHDPGVTLLQSATWNCSDLSYRASLSLNDLLTH
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Known secondary structure (DSSP)



TTTSSSSSSSS


STTSTTS
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence QDQSTLFPEEFGPEQVLTCNTVTAEDYRRALLDVHSSFSDVSLTQEPKEHRFHWGNLWLSLVPTRYTQSL
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Known secondary structure (DSSP) SS
SSSS
GGGSTTTSTTS



STTTTTT




S








TTSSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SPENLAAVEQCLAEFLAAHRNLGEVVSRITWLQPATFSPRMTIELADNINQVAAQIYQVTDAFLRPAVAR
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Known secondary structure (DSSP)
SSS

SS



B

B




BS



STTS




 .........220.........230.........240.........250.........260.........270.........280
Sequence YTTEQRRALGDADDAIFEGPRLKHGWQQTAPSQITSGGYVLNLGPLVNLLLAIPGVASLSTLSVDKGDGH
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Known secondary structure (DSSP)

TTS

S
SS

SS










SS



B


TTTTTTTSTTSTTB





SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ITAVTGDNLRWQVADGYYPLLWGAPPLSLLAGDDSPLTLVRNTLESEAMAGYLTQADLIVTTPTVLPAGR
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Known secondary structure (DSSP) S


S
TTTTB



SSB



SSGGGGSSSS
S









TSS
















 .........360.........370.........380.........390.........400.........410.........420
Sequence FRDQTLYIPIGQRQPECYALQQPDTVIDDQTRAVHQFLLPVDQLLADGTAELAQLPTLLAFKNRGDAIRG
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Known secondary structure (DSSP)








GGGTS
TTT



TTTT

SSTTSTTS
SSS

SBSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TRWPYTNAMVQQAIHQPYAKTLEAIAQQDAAIFTQDKQPVGGNYARELDFLQYLLGYFGTQRAALPLTLD
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Known secondary structure (DSSP)





TTSSGGGTTB

SSS

SSSTTTTT






SSS
 .........500.........510.........520.........530.........540........
Sequence LPDFLATQRAYLAQQPALGYDRINIRIDQVSALQKRIAARIGLDSICFADNPDLGQLP
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Known secondary structure (DSSP)
SSTTS


TTS

TTT

SSSSS




S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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