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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6r72A_

Fold library idPDB HeaderMoleculeTitle
c6r72A_3.95PDB header: transport proteinChain: A: PDB Molecule: multidrug exporter atp-binding cassette;


Added to library: Sat May 9 10:32:04 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SKLKPFFALVRRTNPSYGKLAFALALSVVTTLVSLLIPLLTKQLVDGFSMSNLSGTQIGLIALVFFVQAG
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Known secondary structure (DSSP)

STS

SSTTTGGGTTT
STTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSAYATYALNYNGQKIISGLRELLWKKLIKLPVSYFDTNASGETVSRVTNDTMVVKELITTHISGFITGI
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Known secondary structure (DSSP) TSS
TTT
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ISVIGSLTILFIMNWKLTLLVLVVVPLAALILVPIGRKMFSISRETQDETARFTGLLNQILPEIRLVKAS
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Known secondary structure (DSSP)
SSTTTGGGSTTGGGGGTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NAEDVEYGRGKMGISSLFKLGVREAKVQSLVGPLISLVLMAALVAVIGYGTAGALVAFILYLFQIIMPMG
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Known secondary structure (DSSP) T
TTTTSTTTTT


TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QITTFFTQLQKSIGATERMIEILAEEEEDTVTGKQIENAHLPIQLDRVSFGYKPDQLILKEVSAVIEAGK
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Known secondary structure (DSSP) SS

S


SS


SS



S
SSTT

S


B
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VTAIVGPSGGGKTTLFKLLERFYSPTAGTIRLGDEPVDTYSLESWREHIGYVSQESPLMSGTIRENICYG
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Known secondary structure (DSSP)




TTSSTT
S

SS
SSSBTTSS
TTSB

B
SS



SSBTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LERDVTDAEIEKAAEMAYALNFIKELPNQFDTEVGERGIMLSGGQRQRIAIARALLRNPSILMLDAATSS
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Known secondary structure (DSSP) STTSS
TT
TTSS
STT
B

TTSTTS


SBSTTSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LDSQSEKSVQQALEVLMEGRTTIVIAHRLSTVVDADQLLFVEKGEITGRGTHHELMASHGLYRDFAEQQL
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Known secondary structure (DSSP) S
TSSS

SSTTTSTT
SSTTSSTTTTTTS
SSST
 .........570.
Sequence KMNADLENKAG
Predicted secondary structure


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Known secondary structure (DSSP) GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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