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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6r5kO_

Fold library idPDB HeaderMoleculeTitle
c6r5kO_4.80PDB header: rna binding proteinChain: O: PDB Molecule: pan2-pan3 deadenylation complex subunit pan3;


Added to library: Sat Jun 1 08:58:24 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PPHSLLQYHLYAPEQPSSLKSLLKPNERSADQLFIPNNIREDLTKKNLSILQVFPSSGKVIPSIVQDYFN
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Known secondary structure (DSSP)




S
SS
SS



TS

SS


S

T


S


TTS

BSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LVPLNFNNNDFLNKTTLFKVFSNYDGKAYVLKRLPNIDKSMNPNKISKIYQIWSKINCTNLIKFRDIFQT
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Known secondary structure (DSSP)

SS
S
TTS

SSSTT




S


S


TT



 .........150.........160.........170.........180.........190.........200.........210
Sequence TKFGDLSICLVFDYYPNSLSLYDYHFVNFPKFPITNNYLWIYLVQLTNVINSIHSQNLSIGNTLNWRKVL
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Known secondary structure (DSSP) S
TTTT

S



TTS
SS




T



S

SSSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence ITGDPGRIKLSHCNFMDLLFTIEGQQQLDYKYLGELLFNLSINIENSNNNTAPKEYRLEEITPQSIDDMR
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Known secondary structure (DSSP)

SSS







S
SSTT

TTTT






STT


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence QIDDKFKDVLKYLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLVNKLN
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Known secondary structure (DSSP) S


S


S
S


TTTTSTT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence CIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDEL
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Known secondary structure (DSSP) S

TTTTTSSS


STTTT

B
SSS
B


T
S

SSSS
 .........430.........440.......
Sequence NCIIISYKELKDLIESTFRSITQHHHH
Predicted secondary structure



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Known secondary structure (DSSP) S

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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