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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6r5kH_

Fold library idPDB HeaderMoleculeTitle
c6r5kH_4.80PDB header: rna binding proteinChain: H: PDB Molecule: polyadenylate-binding protein, cytoplasmic and nuclear;


Added to library: Sat Jun 1 09:12:53 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPI
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Known secondary structure (DSSP)

SS

TT

TTTS


TTTT
SS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFE
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Known secondary structure (DSSP) TT


SSTTS
SS


BS

TT

TTTT


T

S
BTTTB

S



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence EEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGP
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Known secondary structure (DSSP) S
SS

SSS


B
SS


S

TTT
SS


S

TT

TTTTGGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLE
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Known secondary structure (DSSP)
S


B
TTSSB
S


SSSSSTT

SSSS

T

TTS

TTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQ
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Known secondary structure (DSSP) SSS

TTT


SS

GGGS




SSSS


S
S
TTSS
 .........360.........370.........380.........390....
Sequence QIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQATAAAAA
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Known secondary structure (DSSP)
BSSSSB



SSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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