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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6qztB_

Fold library idPDB HeaderMoleculeTitle
c6qztB_2.93PDB header: rna binding proteinChain: B: PDB Molecule: crispr-associated (cas) dxthg family;


Added to library: Sat Oct 5 08:21:00 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKCLFYIAGDVSNYSIVNYELNGQTQNTFFAAHALYNLFKPDKVIALIPDSLVKDNVSDEECYKNLVINR
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Known secondary structure (DSSP)




STT



TT

SS

S

TTTSS
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AKELNFAGMEEFMNKVEIRKIPNVGIASAIQCENGAPKKEKNKEGREVLKRLPYNEKRSPIFIFNAIYAI
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Known secondary structure (DSSP) TT
S

TTTTTS
B




BS


SSSSB



SSS




B




B


 .........150.........160.........170.........180.........190.........200.........210
Sequence FKDEACDEYLVDLTHGTNVLVSIGMNVGALFNAKFYSAPVMGMPGKDSIVNIVELTDVVQATNDSLMIRS
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Known secondary structure (DSSP) T

S
SSS
TTT



S


SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence SIENLDERYFKDYSAKLSRLNPTIFEEEEKKVLTRVKGTDVNVVINFLWNIRNGFTVNAVKSMNELKNII
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Known secondary structure (DSSP) TT
GGG



S


SS

T

T
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence NQLEEDLEKLKSFYKNWEEHKNFQGETLLVLSDLDSTLKVKDLLIEGNDLEKLNYLLDLYIKASIYDKAL
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Known secondary structure (DSSP) TTTT
TTGGG

S

GGGGGG


S
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SLARELPVAICLNKVGGGMFDDKNEKYKHCNEIVTSYLRLRYSGLMEFRNTLMHGGLSTDMKPNVDKDGN
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Known secondary structure (DSSP) TT


SSTT


SSSTTT


SS

 .........430.........440.........450....
Sequence ITPGKIVTKNKIEDFVKRELRNYFDKIVNFLSSA
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Known secondary structure (DSSP)
SS


TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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