PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6qxfE_

Fold library id	PDB Header	Molecule	Title
c6qxfE_	3.60	PDB header: dna binding protein	Chain: E: PDB Molecule: crispr-associated protein csn2;

Links to external resources
Added to library: Sat May 11 08:13:52 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K I N F S L L D E P M E V N L G T V L V I E D V S V F A Q L V K E F Y Q Y D E Q S N L T I F D S K I R S I R S S E L L L I T D I L G Y D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S
S
T T T T
S S S
T T
B
T T T
S T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N T S Q V L K L L H T D I V S Q L N D K P E V R S E I D S L V S L I T D I I M A E C I E N E L D I E Y D E I T L L E L I K A L G V R I E T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S C T V F E K I F E I L Q I F K Y L V K K R I L V F V N S L S Y F S K D E I Y Q I L E Y T K L S Q A D V L F L E P R Q I E G I Q Q F I L D K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S
T T S S
S S
T T S
T

. . . . . . . .

Sequence D Y I L M P Y N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	I	N	F	S	L	L	D	E	P	M	E	V	N	L	G	T	V	L	V	I	E	D	V	S	V	F	A	Q	L	V	K	E	F	Y	Q	Y	D	E	Q	S	N	L	T	I	F	D	S	K	I	R	S	I	R	S	S	E	L	L	L	I	T	D	I	L	G	Y	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	S	S						S																					T	T	T	T		S	S	S					T	T			B			T	T	T							S	T	T	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	T	S	Q	V	L	K	L	L	H	T	D	I	V	S	Q	L	N	D	K	P	E	V	R	S	E	I	D	S	L	V	S	L	I	T	D	I	I	M	A	E	C	I	E	N	E	L	D	I	E	Y	D	E	I	T	L	L	E	L	I	K	A	L	G	V	R	I	E	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																													S	S	S																	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	C	T	V	F	E	K	I	F	E	I	L	Q	I	F	K	Y	L	V	K	K	R	I	L	V	F	V	N	S	L	S	Y	F	S	K	D	E	I	Y	Q	I	L	E	Y	T	K	L	S	Q	A	D	V	L	F	L	E	P	R	Q	I	E	G	I	Q	Q	F	I	L	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S																S	S								S		T	T	S	S																								S	S			T	T	S							T
	.	.	.	.	.	.	.	.
Sequence	D	Y	I	L	M	P	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S