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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6qwtA_

Fold library idPDB HeaderMoleculeTitle
c6qwtA_2.30PDB header: viral proteinChain: A: PDB Molecule: genome polyprotein;


Added to library: Sat Oct 12 08:28:11 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEILACEPGGPPPHVPRRSKLVKSPAYGAFPVTKEPAVLSRHDRRTEADVDQVAFSAAGGGDIDEPWPSL
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Known secondary structure (DSSP)




SS





S
S

TTTTSS





STT
TT
SS
TTTTTS



S

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IPAVKLYFSRCNFPPLHTLTMLEAINGTPLLDGIDMNQSAGYPWCLTLNRRSLFDVGEDGLYHPCPELYQ
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Known secondary structure (DSSP)






TT


TTS


TTGGGT

SGGG
TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EIEACLHNPDYFYTTFLKDELRGVDKVAAAKTRLIEAAPIHAIIAGRMLFGGLFEAMHSQPGMYGSAVGC
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Known secondary structure (DSSP)






TT




STSTTGGGB
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DPDYHWTPFYHSFLDYSEVWALDYSNFDSTIPSVVFKLIGEELAKIIQLPPSIPPDAVQKYVQSIYLSKH
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Known secondary structure (DSSP)
T
S
S

S



TTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VFGDQWYIMKGGNPSCVGTSILNSMVNNISLLSAMLTHPDFDTSAWRILCYGDDVLYATVPSIHPSFIAD
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Known secondary structure (DSSP) TTSS



TTSTT

TTSTTSS


 .........360.........370.........380.........390.........400.........410.........420
Sequence FYHSQTNYKVTPADKASTFPETSSIHDVTFLKRHFVPDERFPTYIHPVISPETYQQSVMWTRGGPFQDVI
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Known secondary structure (DSSP) SS

TTS
SS

S


TTT

BTT
SSSTTS
TT
SS
 .........430.........440.........450.........460.........470.
Sequence TSLCYLAHHAGPNNYQKWCDTVQAQCLKSGFEPIFIPYEVLQYRWLATVMT
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Known secondary structure (DSSP) GGG
TT






TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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