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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6qtiB_

Fold library idPDB HeaderMoleculeTitle
c6qtiB_2.90PDB header: membrane proteinChain: B: PDB Molecule: nicotinamide nucleotide transhydrogenase;


Added to library: Sat Aug 31 08:36:32 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VKPGIPYKQLTVGVPKEIFQNEKRVALSPAGVQALVKQGFNVVVESGAGEASKFSDDHYRAAGAQIQGAK
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Known secondary structure (DSSP)

SS

STT




STT



S

TTTTTTT
SSSSTTTT

TT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EVLASDLVVKVRAPMLNPTLGIHEADLLKTSGTLISFIYPAQNPDLLNKLSKRNTTVLAMDQVPRVTIAQ
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Known secondary structure (DSSP) SSS
SS


TTTTGGGSS
TT



TTT
TTT
SSS



STTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GYDALSSMANIAGYKAVVLAANHFGRFFTGQITAAGKVPPAKILIVGGGVAGLASAGAAKSMGAIVRGFD
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Known secondary structure (DSSP) SS
BTTB
S
SS

TT





SST


B
 .........220.........230.........240.........250.........260.........270.........280
Sequence TRAAALEQFKSLGAEPLEVDLKESGEGQGGYAKEMSKEFIEAEMKLFAQQCKEVDILISTALIPGKKAPI
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Known secondary structure (DSSP) SST





SS





TTT





TTT
S



TTS



 .........290.........300.........310.........320.........330.........340.........350
Sequence LFNKEMIESMKEGSVVVDLAAEAGGNFETTKPGELYVHKGITHIGYTDLPSRMATQASTLYSNNITKLLK
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Known secondary structure (DSSP)
B
TTS
TT
TT
SSS
SBSS

TT



STT


S

GGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence AISPDKDNFYFEVKDDFDFGTMGHVIRGTVVMKDGQVIFPAPTPKNIPQGAPVKQKTVAELEAEKAATIT
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Known secondary structure (DSSP) S

SSS










TTSTT

S



SS

SS






SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PFRKTMTSASVYTAGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTPALHSPLMSVTNAISGL
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Known secondary structure (DSSP) T

SSSS
GGGGGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence TAVGGLVLMGGHLYPSTTSQGLAALATFISSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLLPAGTFVG
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Known secondary structure (DSSP) TT

SSSS

STSS

TTS



GGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence GYLASLYSGYNIEQIMYLGSGLCCVGALAGLSTQGTARLGNALGMIGVAGGLAATLGGLKPCPELLAQMS
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Known secondary structure (DSSP) TTT


STTSSSSTTSS


 .........640.........650.........660.........670.........680.........690.........700
Sequence GAMALGGTIGLTIAKRIQISDLPQLVAAFHSLVGLAAVLTCIAEYIIEYPHFATDAAANLTKIVAYLGTY
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Known secondary structure (DSSP)

STTTGGGSSS
SSTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence IGGVTFSGSLVAYGKLQGILKSAPLLLPGRHLLNAGLLAASVGGIIPFMMDPSFTTGITCLGSVSALSAV
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Known secondary structure (DSSP) TSS
SS



SS
TSS


 .........780.........790.........800.........810.........820.........830.........840
Sequence MGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNNLLTIVGALIGSSGAILSYIMCVAMNRSLANV
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Known secondary structure (DSSP) TTS
SSST
TT

 .........850.........860.........870.........880.........890.........900.........910
Sequence ILGGYGTTSTAGGKPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKK
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Known secondary structure (DSSP) TT
SS
TT

SS





S




S
TT
TTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence VRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGM
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Known secondary structure (DSSP)

TT
SSSTTT

GGG
GGGSTT
SS
SGGG
T
TTSTTTT
 .........990.........1000.........1010.........1020.........1030........
Sequence PVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKVRESYQ
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Known secondary structure (DSSP)



GGGSSSSS


SS
SS
TTTTSTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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