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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6qglA_

Fold library idPDB HeaderMoleculeTitle
c6qglA_2.69PDB header: viral proteinChain: A: PDB Molecule: vp5;


Added to library: Sat Mar 2 08:23:18 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AIGAAAISAVGGIGVGWTLREFEVVGSDDPAEGLTPDVLRNQLSDSVVKRKSNNQSTMVDNQNILDGVEH
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Known secondary structure (DSSP)


STT
SSB
S


GGGTS










SS

TTT
GGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TAYTEAKIAAIEELNAGSSESAVLSAANSAIDSYETTVRTNFYKSWNETVRELEAMTQTVIAHADVGLSY
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Known secondary structure (DSSP) TT


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ITDFGDPRFGNLASGTSPNTLKDTTVSMPDGTNFTLLTFRHNTGWDSGNAAYSVVEYNPKEVVTSTNSNT
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Known secondary structure (DSSP)

SS



TTS
TT

S
TTS

S

TTSTT


SS
S

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence YNTVDGTQYMKFSEWNAVETEMDTVFQNVRNGISTWVTNVYGDVQSGAIEISDLVTPRERATMMAQEEGM
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Known secondary structure (DSSP) STTS
TTTS
TTS


TT


S
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SQAIADLIALNVPVDAEREATITIQDTGATLPGTFALTDSSDGPLSAGQTYDPSTFSGDVYFTADMSLVE
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Known secondary structure (DSSP)
TT

B

STTT

S
GGG



TT

TTTSSS
GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence GPWDAINSGVDGGTITITSEPYEGTAIEVTTVESETVSVPAADWTDNGDGTWSYDASGDLETTITNVDSA
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Known secondary structure (DSSP)


B
SBTTSS


TTTTS
GGG

SSS

TTT
S
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence RFVSTATETTYDTLQLKGAFTVDKLVNKQSGEEVSSTSFTSSEPQTDSNYITQDEWDQLEQQNKELIEKY
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Known secondary structure (DSSP)

SS


S
SSS

B
SS


B





SS


ST
 .
Sequence E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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