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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6qgiA_

Fold library idPDB HeaderMoleculeTitle
c6qgiA_2.46PDB header: viral proteinChain: A: PDB Molecule: vp5;


Added to library: Sat Mar 2 08:23:03 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IAPLVGVGLAAGAVGVGWALREFEIVGSDAPPEGLTADALKQQVYQTAKTRKSTNASTIVDNQNILDGVK
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Known secondary structure (DSSP)
B





SS


GGGTS










SS

TTT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HTAYTDAKIAAIEELNAGSAESAVLDAATTEVNSYLTTVQSNFLKTWNESVAELDSILSTVVNHPDIGKG
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Known secondary structure (DSSP) TT

SSS

GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence DVFLMLNGSDNTIEDLLANPSGSTDATSFTLADGTTMSVGTVEVDRGTESYYYDPMSGLVGDLGDLKNGG
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Known secondary structure (DSSP) GTB

BBTTS
B
S
TTSTTS
TTS

TT
TTT



STTSBTTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PTVQYDGDSLVYLNASNWKPIYDEMDTVLQNVRSGISTWVSNVYGDVQSGEIEVSDLVTPRERAAMMAQE
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Known secondary structure (DSSP)
TT
S
BTTB
TTS


SS


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence EGMSQAIADLIALNVPVDAEREATITIQDTGATLPGTFALTDASDGPLESGKTYDPSTFSGDVYFTADMS
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Known secondary structure (DSSP) SSS
TT

TTTTS
TTS


BTT

GGG
SS
GG
 .........360.........370.........380.........390.........400.........410.........420
Sequence LVEGDWTAYQSGVDGGNVTLTSEPYSGTAVELNTAANETVAVDAGNWTATGNGTWYHDVSPELETDITSI
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Known secondary structure (DSSP) G



B
SBTTSS

BTTTTS
GGGS
TTS

TTT
S

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ESARFLSTAEQTQYETIQLQGSFTIDKLTNTQTGEEVTATSFDSSEPHTDSNYITQEEWDQLEQQNKELI
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Known secondary structure (DSSP)

SS


S
TTT

B
SB


B





SS


S
 ........
Sequence EKYEQSQS
Predicted secondary structure

SS confidence







Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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