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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6qdiA_

Fold library idPDB HeaderMoleculeTitle
c6qdiA_1.13PDB header: sugar binding proteinChain: A: PDB Molecule: pa14 domain-containing protein;


Added to library: Sat Jun 15 08:46:57 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMGLRGDYFDNIDLTNFKLTRVDKTIDFFWGVNSPAKEIRNDESYSVRWTGKIRPLYSEEYTFYISRDNG
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Known secondary structure (DSSP)

SSSTTS
SSSSTS
SSTTS
SSS

SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VRLWIDNKLIIDKWDNLVGLEMGKIYLEAGKLYDIKLEYFNNTGNGFVKLEWSSASTVRSIVPTECLYPA
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Known secondary structure (DSSP) TT
SSS


TT

SS
TT

GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence EPKHYGSSIPGKGIGLFYEYFDEDNLTNPKEKGIDSVIDFNWGVGSPSKSINQDQKFSVRWTGFIQVPYD
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Known secondary structure (DSSP)




S








SSTTS
SS

T

SSTTS
SSS


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GDYVFYVSYDDGASLWIDRQLLIDKWTASEINTAKTEAISLKAGQRVEVMLLYRNTGLAGSIRLEWEGPG
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Known secondary structure (DSSP) TT



TT

SS
TT
 .........290....
Sequence IERSVVPQSCLYPR
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Known secondary structure (DSSP)

GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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