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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6q2fA_

Fold library idPDB HeaderMoleculeTitle
c6q2fA_2.20PDB header: hydrolaseChain: A: PDB Molecule: glycoside hydrolase family protein;


Added to library: Sat Nov 30 08:31:36 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EPSLEQAFKDPPSSARPRVWWHWXNGNITKDGIRKDLEWXKRVGIGGLQNFDANLQTPQIVDHRLVYXTP
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Known secondary structure (DSSP)


S

GGGS
TT


T








SSS


TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EWKDAFRFAAHEADRLDLELAIAASPGWSETGGPWVKPQDGLKKLVWSETTLAGGQRFVGRLASPPGTTG
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Known secondary structure (DSSP) T
SSSBSBSSB
TTS
GGGB

SS

SB






SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PFQTLHPPVGVSYAGEVGVLAFPVPDIASLPVPRALDGAGNVLAGKALVDADIAGGVTLARVDGKAPLLR
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Known secondary structure (DSSP) SSTT

















SS


GGGGSSS
TT



BTTB

 .........220.........230.........240.........250.........260.........270.........280
Sequence LDYQRPVTVRSATVFVPNVRGAAFAGTLESSQDGKTWTPIKALELSNVPTTISFAPVEAAHFRLVLNPPI
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Known secondary structure (DSSP)
S








SSSS




SS




 .........290.........300.........310.........320.........330.........340.........350
Sequence XVGQFELHSDALVDRYETKAGFVXSRDYYALVGPHDNVTGVDPDSVIDLTDKLKADGTLDWAAPKLPAGQ
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Known secondary structure (DSSP)
SS
B
TTTTSS

S
GGG







B
B
GGG

GGGB
TTSBB





TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence HWRVLRLGYSLLGTTNHPAPPEATGLEVDKFDGEAVREYLEHYIGXYKDAAGPDXVGKRGVRALLTDSIE
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Known secondary structure (DSSP)


B
BS

GGG

BBB
TT

GGGBSSSS



 .........430.........440.........450.........460.........470.........480.........490
Sequence VGEANWTPRXLEQFQRLRGYDARPWLPALTGTLVGTREQSDRFLYDYRRTLADLLASEHYGTVADVAHEN
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Known secondary structure (DSSP)




B
TTSS

GGGGGGGGTB
BSBTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DLKVYGEALEDHRPXLGDDXAXRSHADIPXAALWTFNRDEGPRQTLIADXKGAASVAHLYGQNLVAAESX
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Known secondary structure (DSSP) T




SS
SSSS
TTGGGTTSS


TTT


S



 .........570.........580.........590.........600.........610.........620.........630
Sequence TASXAPWAFAPKDLKRFIDLEFVTGVNRPVIHTSVHVPVDDKKPGLSLAIFGQYFNRQESWAEXARPWVD
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Known secondary structure (DSSP) S
TT


T

S






SSSS

BTT


STTSTTGGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence YIARSSLLLQTGRNVADVAYFYGEEAPLTGLYGDEPVADAPVRYAYDYINFNALTELLANDGEDLVAPSG
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Known secondary structure (DSSP) SS

S

SSS
TSSS

SSS
SSS

T
TT
TTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence ARYKTIYLGGSSSHXTLAALRKLAALVVGGATVVGKAPIATPSNTSAQEGDLTEWSSLVARLWPGSGDAR
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Known secondary structure (DSSP)
S
TTTTB

TT
S



B
S
STT


SSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence VGKGRVIASQDIESALQAXDVAPDFTFTGADAGVKIPFVHRRDGKGEIYYLVNQQEAAQSIEAHFRVTGK
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Known secondary structure (DSSP) TT

S
TT


SSS
TT



TT

SSS
S

S
 .........850.........860.........870.........880.........890.........900.........910
Sequence QPELWHPETGKSEPISYRISGGETVVPLHLDGDEAVFVVFRKAAARDRVTLARQGERAVATLDGAWQVAF
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Known secondary structure (DSSP) TTTT

TT
TT

SSS








S
 .........920.........930.........940.........950.........960.........970.........980
Sequence QADRGAPASIELARLEPLDKSADPGVKYFSGIATYSRNFRVTGKYGEGRSLWLDLGRVGDLAQVSVNGVD
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Known secondary structure (DSSP)
SSSSS
SSS


GGG
SST

S
S

SSS


BSTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VGTAWHAPYRLDIGKAVRKGQNTLEIRVANTWVNRLIGDQQEGAQKITWTAXPTYRADAPLRPSGLIGPV
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Known secondary structure (DSSP)
SSS

TTT

S

STSTT




SS



TT







 .....
Sequence RLIEE
Predicted secondary structure
SS confidence




Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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