PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6q0fA_

Fold library id	PDB Header	Molecule	Title
c6q0fA_	2.20	PDB header: signaling protein	Chain: A: PDB Molecule: putative methyl-accepting chemotaxis protein;

Links to external resources
Added to library: Sat Mar 21 09:15:43 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R E D L D N Y L N E M G E V T A D N I Q T W L S G R I L L I E N A A Q N I A I N P E P A A V A S L L E Q K A L T S T F M A S Y L G D A T G H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F T I R P D A K M P D G F D P R V R P W Y K G A E S S S T S T L T E P Y I D A A T G Q T I I S I A T A A K K A G Q S V G V V G G D L S L Q T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
G G G S T
S S
T T T
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L I N T L S A R D G M G Y A F L V S A D G K I L V H P D K A L V M K S L K E A Y P Q D T P R I S S D F S E R I V N F T P I K G L P S V N W Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T T
B
S S G G G T T
B S
S S
T T S S B
S S
S S

. . . . . . . . . 220

Sequence I G L S V D K D K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	E	D	L	D	N	Y	L	N	E	M	G	E	V	T	A	D	N	I	Q	T	W	L	S	G	R	I	L	L	I	E	N	A	A	Q	N	I	A	I	N	P	E	P	A	A	V	A	S	L	L	E	Q	K	A	L	T	S	T	F	M	A	S	Y	L	G	D	A	T	G	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																			T	S							S	S							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	T	I	R	P	D	A	K	M	P	D	G	F	D	P	R	V	R	P	W	Y	K	G	A	E	S	S	S	T	S	T	L	T	E	P	Y	I	D	A	A	T	G	Q	T	I	I	S	I	A	T	A	A	K	K	A	G	Q	S	V	G	V	V	G	G	D	L	S	L	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S						T	T			G	G	G	S								T		S	S										T	T	T		S												T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	I	N	T	L	S	A	R	D	G	M	G	Y	A	F	L	V	S	A	D	G	K	I	L	V	H	P	D	K	A	L	V	M	K	S	L	K	E	A	Y	P	Q	D	T	P	R	I	S	S	D	F	S	E	R	I	V	N	F	T	P	I	K	G	L	P	S	V	N	W	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T				S							T	T		B					S	S	G	G	G	T	T		B					S		S	S				T	T	S	S	B											S	S		S	S
	.	.	.	.	.	.	.	.	.	220
Sequence	I	G	L	S	V	D	K	D	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S