PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6pzkA_

Fold library id	PDB Header	Molecule	Title
c6pzkA_	3.20	PDB header: viral protein	Chain: A: PDB Molecule: rna-directed rna polymerase l;

Links to external resources
Added to library: Sat Sep 14 08:30:24 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N V Y L T D S Y L K G V I S F S E C N A L G S Y I F N G P Y L K N D Y T N L I S R Q N P L I E H M N L K K L N I T Q S L I S K Y H K G E I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S
S
B T S
S
S T S
T S T T T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L E E P T Y F Q S L L M T Y K S M T S S E Q I A T T N L L K K I I R R A I E I S D V K V Y A I L N K L G L T I K T T L L K K L M C S M Q H P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T
S T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P S W L I H W F N L Y T K L N N I L T Q Y R S N E V K N H G F T L I D N Q T L S G F Q F I L N Q Y G C I V Y H K E L K R I T V T T Y N Q F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S S S S S S T T T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence T W K D I S L S R L N V C L I T W I S N C L N T L N K S L G L R C G F N N V I L T Q L F L Y G D C I L K L F H N E G F Y I I K E V E G F I M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
S
G G G G T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence S L I L N I T E E D Q F R K R F Y N S M L N N I T D A A N K A Q K N L L S R V C H T L L D K T V S D N I I N G R W I I L L S K F L K L I K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T S T T T T
S
T
T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence A G D N N L N N L S E L Y F L F R I F G H P M V D E R Q A M D A V K I N C N E T K F Y L L S S L S M L R G A F I Y R I I K G F V N N Y N R W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G G G T T T
B
T T S
S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence P T L R N A I V L P L R W L T Y Y K L N T Y P S L L E L T E R D L I V L S G L R F Y R E F R L P K K V D L E M I I N D K A I S P P K N L I W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S
G G G S
T T
T T T
T T G G G
B
S
S S
S S B
G G G G G

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence T S F P R N Y M P S H I Q N Y I E H E K L K F S E S D K S R R V L E Y Y L R D N K F N E C D L Y N C V V N Q S Y L N N P N H V V S L T G R M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G S
G G G S
G G G S
T T G G G
B T
T T
G G G T T T T T T T T
T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence F A M Q P G M F R Q V Q I L A E K M I A E N I L Q F F P E S N Y I S K C S I I T D L S K F N Q A F R Y E T S C I C S D V L D E L H G V Q S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G
T T
T T
G G G T T T
T T S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence F S W L H L T I P H V T I I C T Y R H A P P Y I G D H I V D L N N V D E Q S G L Y R Y H M G G I E G W C Q K L W T I E A I S L L D L I S L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T G G G S
T T
T T
S T T S S
B T T
S
S S T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence G K F S I T A L I N G D N Q S I D I S K P I R L M E G Q T H A Q A D Y L L A L N S L K L L Y K E Y A G I G H K L K G T E T Y I S R D M Q F M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T
T T T
T T S S S
B
G

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence S K T I Q H N G V Y Y P A S I K K V L R V G P W I N T I L D D F K V S L E S I G S L T Q E L E Y R G E S L L C S L I F R N V W L Y N Q I A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
T T
T T
S T T T T
S T T
T T S
T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence Q L K N H A L C N N K L Y L D I L K V L K H L K T F F N L D N I D T A L T L Y M N L P M L F G G G D P N L L Y R S F Y R R T P D F L T E A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G B T T T B T T T
S
T T S B G G G T
S B S S
T T T T T B S
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence V H S V F I L S Y Y T N H D L K D K L Q D L S D D R L N K F L T C I I T F D K N P N A E F V T L M R D P Q A L G S E R Q A K I T S E I N R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S
S T T
T T
T T
S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence A V T E V L S T A P N K I F S K S A Q H Y T T T E I D L N D I M Q N I E P T Y P H G L R V V Y E S L P F Y K A E K I V N L I S G T K S I T N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T T T
S S B
S T T T S S S G G G

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence I L E K T S A I D L T D I D R A T E M M R K N I T L L I R I L P L D C N R D K R E I L S M E N L S I T E L S K Y V R E R S W S L S N I V G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T
S
B
S
S
S S
T T
T T T
S
B
S S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence T S P S I M Y T M D I K Y T T S T I S S G I I I E K Y N V N S L T R G E R G P T K P W V G S S T Q E K K T M P V Y N R Q V L T K K Q R D Q I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S
S S S S
T T
S S
B
S S
G G G S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence D L L A K L D W V Y A S I D N K D E F M E E L S I G T L G L T Y E K A K K L F P Q Y L S V N Y L H R L T V S S R P C E F P A S I P A Y R T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S T T T
S
G G G S
S
T T T S
T T S
S B
B S S
G G G G G

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence N Y H F D T S P I N R I L T E K Y G D E D I D I V F Q N C I S F G L S L M S V V E Q F T N V C P N R I I L I P K L N E I H L M K P P I F T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
T T T T
B S
S S
S
G G G
B
S

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 .

Sequence D V D I H K L K Q V I Q K Q H M F L P D K I S L T Q Y V E L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G S

Download: PDB structure FASTA sequence
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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	V	Y	L	T	D	S	Y	L	K	G	V	I	S	F	S	E	C	N	A	L	G	S	Y	I	F	N	G	P	Y	L	K	N	D	Y	T	N	L	I	S	R	Q	N	P	L	I	E	H	M	N	L	K	K	L	N	I	T	Q	S	L	I	S	K	Y	H	K	G	E	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B					S	S			S			B													T	S			S			S	T								S										T	S	T	T										T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	E	E	P	T	Y	F	Q	S	L	L	M	T	Y	K	S	M	T	S	S	E	Q	I	A	T	T	N	L	L	K	K	I	I	R	R	A	I	E	I	S	D	V	K	V	Y	A	I	L	N	K	L	G	L	T	I	K	T	T	L	L	K	K	L	M	C	S	M	Q	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T																																						T	T					S										T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	S	W	L	I	H	W	F	N	L	Y	T	K	L	N	N	I	L	T	Q	Y	R	S	N	E	V	K	N	H	G	F	T	L	I	D	N	Q	T	L	S	G	F	Q	F	I	L	N	Q	Y	G	C	I	V	Y	H	K	E	L	K	R	I	T	V	T	T	Y	N	Q	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												S	T	T						S	S	S	S	S	S							T	T							T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	W	K	D	I	S	L	S	R	L	N	V	C	L	I	T	W	I	S	N	C	L	N	T	L	N	K	S	L	G	L	R	C	G	F	N	N	V	I	L	T	Q	L	F	L	Y	G	D	C	I	L	K	L	F	H	N	E	G	F	Y	I	I	K	E	V	E	G	F	I	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											T	T	T	S		S																							G	G	G	G					T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	L	I	L	N	I	T	E	E	D	Q	F	R	K	R	F	Y	N	S	M	L	N	N	I	T	D	A	A	N	K	A	Q	K	N	L	L	S	R	V	C	H	T	L	L	D	K	T	V	S	D	N	I	I	N	G	R	W	I	I	L	L	S	K	F	L	K	L	I	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S																															T	T	T	S	T	T	T	T		S						T		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	G	D	N	N	L	N	N	L	S	E	L	Y	F	L	F	R	I	F	G	H	P	M	V	D	E	R	Q	A	M	D	A	V	K	I	N	C	N	E	T	K	F	Y	L	L	S	S	L	S	M	L	R	G	A	F	I	Y	R	I	I	K	G	F	V	N	N	Y	N	R	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								G	G	G	G	G	T	T	T					B		T	T												S																													S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	T	L	R	N	A	I	V	L	P	L	R	W	L	T	Y	Y	K	L	N	T	Y	P	S	L	L	E	L	T	E	R	D	L	I	V	L	S	G	L	R	F	Y	R	E	F	R	L	P	K	K	V	D	L	E	M	I	I	N	D	K	A	I	S	P	P	K	N	L	I	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	S		G	G	G	S										T	T					T	T	T			T	T					G	G	G			B				S				S	S									S	S	B					G	G	G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	S	F	P	R	N	Y	M	P	S	H	I	Q	N	Y	I	E	H	E	K	L	K	F	S	E	S	D	K	S	R	R	V	L	E	Y	Y	L	R	D	N	K	F	N	E	C	D	L	Y	N	C	V	V	N	Q	S	Y	L	N	N	P	N	H	V	V	S	L	T	G	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S		G	G	G	S												G	G	G	S		T	T	G	G	G		B							T		T	T			G	G	G	T					T	T	T	T	T	T	T		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	A	M	Q	P	G	M	F	R	Q	V	Q	I	L	A	E	K	M	I	A	E	N	I	L	Q	F	F	P	E	S	N	Y	I	S	K	C	S	I	I	T	D	L	S	K	F	N	Q	A	F	R	Y	E	T	S	C	I	C	S	D	V	L	D	E	L	H	G	V	Q	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	G	G	G		T	T														T	T							G	G	G	T											T	T		T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	S	W	L	H	L	T	I	P	H	V	T	I	I	C	T	Y	R	H	A	P	P	Y	I	G	D	H	I	V	D	L	N	N	V	D	E	Q	S	G	L	Y	R	Y	H	M	G	G	I	E	G	W	C	Q	K	L	W	T	I	E	A	I	S	L	L	D	L	I	S	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						G	G	G	S							T	T							T	T			S	T	T	S	S			B	T	T							S			S	S	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	G	K	F	S	I	T	A	L	I	N	G	D	N	Q	S	I	D	I	S	K	P	I	R	L	M	E	G	Q	T	H	A	Q	A	D	Y	L	L	A	L	N	S	L	K	L	L	Y	K	E	Y	A	G	I	G	H	K	L	K	G	T	E	T	Y	I	S	R	D	M	Q	F	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									T	T														T	T																								T	T	T					T	T	S					S	S		B		G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	S	K	T	I	Q	H	N	G	V	Y	Y	P	A	S	I	K	K	V	L	R	V	G	P	W	I	N	T	I	L	D	D	F	K	V	S	L	E	S	I	G	S	L	T	Q	E	L	E	Y	R	G	E	S	L	L	C	S	L	I	F	R	N	V	W	L	Y	N	Q	I	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G					T	T											T	T		S	T	T	T	T		S	T	T														T					T	S																				T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	Q	L	K	N	H	A	L	C	N	N	K	L	Y	L	D	I	L	K	V	L	K	H	L	K	T	F	F	N	L	D	N	I	D	T	A	L	T	L	Y	M	N	L	P	M	L	F	G	G	G	D	P	N	L	L	Y	R	S	F	Y	R	R	T	P	D	F	L	T	E	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G	B	T	T	T	B	T																	T	T		S										T	T	S	B	G	G	G	T		S	B	S	S		T	T	T	T	T	B	S			S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	V	H	S	V	F	I	L	S	Y	Y	T	N	H	D	L	K	D	K	L	Q	D	L	S	D	D	R	L	N	K	F	L	T	C	I	I	T	F	D	K	N	P	N	A	E	F	V	T	L	M	R	D	P	Q	A	L	G	S	E	R	Q	A	K	I	T	S	E	I	N	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S	S						S																				S	T	T							T	T				T	T		S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	A	V	T	E	V	L	S	T	A	P	N	K	I	F	S	K	S	A	Q	H	Y	T	T	T	E	I	D	L	N	D	I	M	Q	N	I	E	P	T	Y	P	H	G	L	R	V	V	Y	E	S	L	P	F	Y	K	A	E	K	I	V	N	L	I	S	G	T	K	S	I	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		S																					T	T	T	T		S	S	B												S	T												T	T	S	S	S	G	G	G
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	I	L	E	K	T	S	A	I	D	L	T	D	I	D	R	A	T	E	M	M	R	K	N	I	T	L	L	I	R	I	L	P	L	D	C	N	R	D	K	R	E	I	L	S	M	E	N	L	S	I	T	E	L	S	K	Y	V	R	E	R	S	W	S	L	S	N	I	V	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	T		S		B																							S			S						S	S					T	T														T	T	T		S		B		S	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	T	S	P	S	I	M	Y	T	M	D	I	K	Y	T	T	S	T	I	S	S	G	I	I	I	E	K	Y	N	V	N	S	L	T	R	G	E	R	G	P	T	K	P	W	V	G	S	S	T	Q	E	K	K	T	M	P	V	Y	N	R	Q	V	L	T	K	K	Q	R	D	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S			T	T			S							S	S	S	S			T	T				S	S						B										S	S		G	G	G	S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	D	L	L	A	K	L	D	W	V	Y	A	S	I	D	N	K	D	E	F	M	E	E	L	S	I	G	T	L	G	L	T	Y	E	K	A	K	K	L	F	P	Q	Y	L	S	V	N	Y	L	H	R	L	T	V	S	S	R	P	C	E	F	P	A	S	I	P	A	Y	R	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	S	T	T													T		S						G	G	G	S						S		T	T	T	S				T	T	S		S	B			B	S	S		G	G	G	G	G
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	N	Y	H	F	D	T	S	P	I	N	R	I	L	T	E	K	Y	G	D	E	D	I	D	I	V	F	Q	N	C	I	S	F	G	L	S	L	M	S	V	V	E	Q	F	T	N	V	C	P	N	R	I	I	L	I	P	K	L	N	E	I	H	L	M	K	P	P	I	F	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G															T	T	T	T			B	S																						S	S			S								G	G	G			B								S
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.
Sequence	D	V	D	I	H	K	L	K	Q	V	I	Q	K	Q	H	M	F	L	P	D	K	I	S	L	T	Q	Y	V	E	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	G	G	G	S