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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6pw4A_

Fold library idPDB HeaderMoleculeTitle
c6pw4A_3.53PDB header: transport proteinChain: A: PDB Molecule: trp-like ion channel;


Added to library: Sat Sep 28 08:49:28 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKPSDYGCQLHYKHARVKGTLITAAELGLVDKYRDLKRAGQDILTCDWPYHYSSILYACYGNQYKILQMV
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Known secondary structure (DSSP)



TTS

S




TTTT



TT


SSS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EREFVGSTQELTAMHTTRCWVGKNSAMVAAYQGHLETMLYIIDLDMQGKFTEDLFKQRDVMGKNAMMWAA
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Known secondary structure (DSSP) S

SS


SSS

TT
T

SS
TTS


SSS

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SQGHTDTIEVLLVRSLYRLLPEDCADPLVLKTRWKLVSLLADLASHCRDYDPGCSRSFFQEVLASIKYDP
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Known secondary structure (DSSP) TT
S
SS







SSSS
S

S
STT



 .........220.........230.........240.........250.........260.........270.........280
Sequence VAVKLKDVHITVRTLQGVIVSAYRAGMNCMGVIMYCQSLLQQARYFDDLVAQLTAWEVKLLDTCRNKQEV
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Known secondary structure (DSSP)



SSSSS

S

TTSSS
TTTTT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence QAILAPTEDDPSEPVGYALATFDKAFLSHKFVQQIFTEKWDTMGVTDYTKSLFGVVWGGCSLVVAFAAWA
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Known secondary structure (DSSP) T


SSS


TTTT
TSTTT
SSGGGSSSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TICPLVVVARSFLSPVQDFMMRGKVIVDSRFPWHVPLYRWLLTQCALITFTVLLSYLVFSFDPSDPVPAS
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Known secondary structure (DSSP) TTSSSTS
SSS
STTSGGG
S

TT

STTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VAPLNTFLAVWCAAILVDEVQEYVEEGRAEYMSSGWNVMDVTMALSYILHYILRIIAVRVTDNLNILLVV
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Known secondary structure (DSSP) S
TTTTTTTTTT
STTTTTSSSTTTTSSSSSSS




 .........500.........510.........520.........530.........540.........550.........560
Sequence NDLLAAAALMAWFRMVSVFELSSAIGPLIQMMKQMLIKDVTRFALLVLVILLGFSVGMEALFQERVTGVI
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Known secondary structure (DSSP) GGGGGSSSTTTTTTTTTTTTTTGGG

 .........570.........580.........590.........600.........610.........620.........630
Sequence FYLIFAIVTAILLLNLFIAMLADTYTRVSTQAMVEFRYRKAKLMASYSRRDFVCPPFNLLHLVCAAVGNG
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Known secondary structure (DSSP) TTTTTTTTTS
S

SSTTTTS
 .........640.........650.........660.........670.........680.........690......
Sequence LPVSMRKNETVPLFSWYFPQGEEMRQVVVLQRRVVDDFLNSNRVALFREKLNAELPNLVHEMLKQK
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Known secondary structure (DSSP)


SS
S
SSSSSS

STTTTTSTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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