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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6purD_

Fold library idPDB HeaderMoleculeTitle
c6purD_4.40PDB header: transport proteinChain: D: PDB Molecule: transient receptor potential cation channel subfamily m


Added to library: Sat Sep 28 08:49:12 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QESLSSWIPENIKKKECVYFVESSKLSDAGKVVCQCGYTHEQHLEEATKPHTFQGTQWDPKKHVQEMPTD
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Known secondary structure (DSSP)



S



SS

SS

S
SSS

SSSSS
SS



TT


SS

TTTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence AFGDIVFTGLSQKVKKYVRVSQDTPSSVIYHLMTQHWGLDVPNLLISVTGGAKNFNMKPRLKSIFRRGLV
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Known secondary structure (DSSP)


BTTT
SS

SS

TTT



S


SSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence KVAQTTGAWIITGGSHTGVMKQVGEAVRDFSLSSSYKEGELITIGVATWGTVHRREGLIHPTGSFPAEYI
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Known secondary structure (DSSP) T


SSTSS
S



SSSBSSGGGT

SS

SS

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence LDEDGQGNLTCLDSNHSHFILVDDGTHGQYGVEIPLRTRLEKFISEQTKERGGVAIKIPIVCVVLEGGPG
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Known secondary structure (DSSP)

SSS
SS
B


SS
S

S
SS
S
TTSS

SSSS




SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence TLHTIDNATTNGTPCVVVEGSGRVADVIAQVANLPVSDITISLIQQKLSVFFQEMFETFTESRIVEWTKK
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Known secondary structure (DSSP) TTT


TTS
TTSSS
GGG

TTTSGGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence IQDIVRRRQLLTVFREGKDGQQDVDVAILQALLKASRSQDHFGHENWDHQLKLAVAWNRVDIARSEIFMD
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Known secondary structure (DSSP)

TT
TT

SS


S
SS

TT
TTTSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence EWQWKPSDLHPTMTAALISNKPEFVKLFLENGVQLKEFVTWDTLLYLYENLDPSCLFHSKLQKVLVEDPE
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Known secondary structure (DSSP) S



GGGGTT
T



T

TTST


 .........500.........510.........520.........530.........540.........550.........560
Sequence RPACAPAAPRLQMHHVAQVLRELLGDFTQPLYPRPRHGHVTFTMDPIRDLLIWAIVQNRRELAGIIWAQS
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Known secondary structure (DSSP)



SSSS




SSS

SS










S
TT
GGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence QDCIAAALACSKILKELSKEEEDTDSSEEMLALAEEYEHRAIGVFTECYRKDEERAQKLLTRVSEAWGKT
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Known secondary structure (DSSP) SSTT


TT
BTTTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence TCLQLALEAKDMKFVSHGGIQAFLTKVWWGQLSVDNGLWRVTLCMLAFPLLLTGLISFREKRLQDVGTPA
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Known secondary structure (DSSP) T
TST
SS
S
STT
STTTTTTSS

SSS

 .........710.........720.........730.........740.........750.........760.........770
Sequence ARARAFFTAPVVVFHLNILSYFAFLCLFAYVLMVDFQPVPSWCECAIYLWLFSLVCEEMRQLFYDPDECG
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Known secondary structure (DSSP) S


SS

S


S


 .........780.........790.........800.........810.........820.........830.........840
Sequence LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPATLYPGRVILSLDFILFCLRLMHIFTISKTLGPKII
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Known secondary structure (DSSP)
STT
GGGGGGGGSSSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence IVKRMMKDVFFFLFLLAVWVVSFGVAKQAILIHNERRVDWLFRGAVYHSYLTIFGFPEWLTVLLLCLYLL
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Known secondary structure (DSSP) TS




TTTT


 .........920.........930.........940.........950.........960.........970.........980
Sequence FTNILLLNLLIAMFNYTFQQVQEHTDQIWKFQRHDLIEEYHGRPAAPPPFILLSHLQLFIKRVVLKRHKQ
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Known secondary structure (DSSP) TTTTTTTTTS
SS
TTTT



TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LKNKLEKNEEAALLSWEIYLKENYLQNRQFQQKQRPEQKIEDISNKVDAMVDLLDLDGDSYHVNARHLLY
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Known secondary structure (DSSP) T
B


TTS





TTTS
SS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence PNCPVTRFPVPNEKVPWETEFLIYDPPFYTAERKDAAAMDPMGDTLEPLSTIQYNVVDGLRDRRSFHGPY
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Known secondary structure (DSSP) TTS







SSS
SSSS

TT




GGGSSSSS

GGGTTSTT

S
SSTT

SS


 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence TVQAGLPLNPMGRTGLRGRGSLSCFGPNHTLYPMVTRWRRNEDGAICRKSIKKMLEVLVVKLPLSEHWAL
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Known secondary structure (DSSP)
TT

SS


S
TSSSS
B
SSSSB
B
SSSB

TTT
S
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence PGGSREPGEMLPRKLKRILRQEHWPSFENLLKCGMEVYKGYMDDPRNTDNAWIETVAVSVHFQDQNDVEL
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Known secondary structure (DSSP)

SSSSS
TTTT
SSTT



TT

SS

SSSS
 .........1270.........1280.........1290.........1300......
Sequence NRLNSNLHACDSGASIRWQVVDRRIPLYANHKTLLQKAAAEFGAHY
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Known secondary structure (DSSP)



SS
S

TT

S
GGGTTB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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