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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ptzA_

Fold library idPDB HeaderMoleculeTitle
c6ptzA_1.79PDB header: circadian clock proteinChain: A: PDB Molecule: cryptochrome-1;


Added to library: Sat Sep 7 08:25:42 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPHRTIHLFRKGLRLHDNPTLLAALESSETIYPVYVLDRRFLASAMHIGALRWHFLLQSLEDLHKNLSRL
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Known secondary structure (DSSP)

SS


STT
T




T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GARLLVIQGEYESVLRDHVQKWNITQVTLDAEMEPFYKEMEANIRRLGAELGFEVLSRVGHSLYDTKRIL
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Known secondary structure (DSSP) T


S
T





ST




S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DLNGGSPPLTYKRFLHILSQLGDPEVPVRNLTAEDFQRCMSPEPGLAERYRVPVPADLEIPPQSLSPWTG
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Known secondary structure (DSSP) TTSS


S
S








TTSB



TTGGGGS


GGGGT

S


SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence GETEGLRRLEQHLTDQSTTGLSPYFSMGCLSVRTFFQRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVA
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Known secondary structure (DSSP) S





TSS
TTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence SATQNFTQMAGNPICLQIHWDEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDL
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Known secondary structure (DSSP) TSTTTTSSTT
TTS




B

TT
SS
S


TTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence WISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGKRTDPEGQYIRKYLPVLKNFP
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Known secondary structure (DSSP)
B

TT

TTSSS


TT



TT
TT

GGGTTS
 .........430.........440.........450.........460.........470.........
Sequence TKYIYEPWTASEEEQRQAGCIIGRDYPFPMVNHKEASDRNLQLMRRVREEQRGTAQLTR
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Known secondary structure (DSSP) GGGTT
GGGS
T

BTTTB


SS

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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