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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6pqrD_

Fold library idPDB HeaderMoleculeTitle
c6pqrD_3.40PDB header: recombination/dnaChain: D: PDB Molecule: dna-mediated transposase;


Added to library: Sat Oct 12 08:15:55 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STIFSPEKALGLLLSLKLSKWQYITLRETTIREGSKEIYPSYYKVQKAKLQCYPPKAFVAVTDSSAKIAL
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Known secondary structure (DSSP)

SS
TT

TS

SSS

TSS

TTS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QALLDLTVNRIFETIRSPDAIQNKQLILISKWGFDGASNQGDSSIFMTSLVPLKLTADGDTVWVNPKPCS
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Known secondary structure (DSSP) SS
TTS
SSS





S
TT
S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PMYCRPVQFSFVKETKDVVINEKTAMDDEIEALVPSKCQGHEISHKLMMTMIDGKICTYLSEAKSNAACY
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Known secondary structure (DSSP) GGG
S



TT


TT
T






S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence LCLLDVIASKTISSGVYEFGLSTLARINVMECLLHIAYRLDFKKWSARGEGHQELLHSRKKLIQDRFKDD
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Known secondary structure (DSSP) TT




S



TTS


STTTT
SS

STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LNLLIDIVKQGSGTTNDGNTARRFFEFPDKTAAITGLDEDLIRRFSVILQAITSGEIIDVPKFKEYARTT
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Known secondary structure (DSSP) T



SS

SSSSS


STS
TTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AEKYVELYDWYYMSSTVHKLLIHGGDIIAENAIVPIGSLSEEASEARNKDFRRFREHHSRKKSRQASNED
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Known secondary structure (DSSP) TT

SS


TS



S

S
TSS
TT
 .........430.........440.........450.........460........
Sequence ILNMLIISSDPLISFTRPKLDAHKRQTYFKETVELLQLQDQEAPTEFH
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Known secondary structure (DSSP) TT
SS
















TT

S



SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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