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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ppiE_

Fold library idPDB HeaderMoleculeTitle
c6ppiE_4.70PDB header: virusChain: E: PDB Molecule: portal protein;


Added to library: Sat Sep 14 08:27:46 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSSISVHPSELSISLFEILQGKYSYVRGQTLHCSLRNPGVFFRQLFIHLYKNALANCSYDHVLSDWRTYE
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Known secondary structure (DSSP)





SS
TSS


GGGT
TTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence SSAKTRWPEKEAQWGSYRRSTFDSWAQTMRMTLDHLLLNAINRVLYAKTQLSYERYVDWVVTVGMVPVVK
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Known secondary structure (DSSP) STT

S

TT
SSS

TT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence HTPDHKLVNSIQEQLMKDCQRLASGEKTIGRILTSVTQEISNLVSSLSALYIPGYSEVSIDYDCVKNTFV
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Known secondary structure (DSSP)



SSTTTTT
TSS

TTTS

SSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence GLYKQKRVHVEVITMPAILAGRVIFDSPIQRMYTSIMSCHRTAEHAKLCQLLNTAPTKALVGSVNLLTAN
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Known secondary structure (DSSP)
SSSSS


SS



TTGGGS

S






TTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TFQSLGRLQDPSLQLTSSHIPSGSAVLNSFFSSYIPPVRESMKDLTNLWESEMFQTYKLAPVVDNQGQRL
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SS














TS



GGG
 .........360.........370.........380.........390.........400.........410...
Sequence SVTYSQDTISILLGPFTYVIADLLQMELISHSFVSSSLQDIAAYLYQTSRLFVYITDVGQKYC
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Known secondary structure (DSSP)


TTTTTTS


S




GGGTT

TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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