PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6pnsA_

Fold library id	PDB Header	Molecule	Title
c6pnsA_	3.70	PDB header: viral protein, transferase	Chain: A: PDB Molecule: rna-directed rna polymerase;

Links to external resources
Added to library: Sat Aug 10 08:22:24 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V A I T V Q G A Q L I K R V V E R F Y P G I A F N I N E G A C Y I Y K F S D H I R R I R M K H G T K Y R R Q A E E I I R N I S L R K E R L Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
S S S S
T
S S
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G I P V L D E V E W K Y V F D G Q T F Q S Y A F E V Y V N S I L P W S E L D P E E E F L R N Y R V S R E M T E V E K F I E F R A K N E M Q I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B
S S T T S
S S
T
B
G G G
T T
S S
B
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y G D I P I K V W C C F I N E L S A E L K H V P L G M Q V M A D F V N R F D S P F H Q G N R D L S N L E D F Q V A Y T T P L L F E M C C M E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
T T S
S
B
S S S S S
B
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence S I L E F N I K M R M R E E E I S A L E F G D M K V D P V G L L R E F F I L C L P H P K K I N N V L R A P Y S W F V K M W G V G A D P I V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S T T
T S S S S T T S S T T
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence L Q S T A G D D R N S K D V F Y D K F R T E P N R Y K A L F R S S F Y N E S R R M N E E K I L E A V K Y S Q K L G S H D R R L P L F E K M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
T T S S T T S S T T S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence K T V Y T T P F Y P H K S S N M I L A S F L L S I Q T I T G Y G R A W V K N V S T E F D K Q L K P N P S N L V Q D V S D L T R E F F K Q A Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T S
T T S G G G G G
S B
T T S S
S S S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence V E A K E R R E E I V K P E D L Y T S M L R L A R N T S S G F S T E I Y V K K R F G P L I K I N S R I K A L V I F T K G H T V F T D E E L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G S
S S G G G G T S T T T S S S S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence K K Y N S V E L Y Q T K G S R D V P I K A T R T I Y S I N L S V L V P Q L I V T L P L N E Y F S R V G G I T S P D Y K K I G G K V I V G T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T S
B
B S S S
T T T
T T S
B

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence S R V M D A A D C F R N S A D R D I F T I A I D Y S E Y D T H L T R H N F R T G M L Q G I R E A M A P Y R D L R Y E G Y T L E Q I I D F G Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S S S T T
T T
T T
T T T S S S T G G G
S
B T T B
T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence G E G R V A N T L W N G K R R L F K T T F D A Y I R L D E S E R D K G S F K V P K G V L P V S S V D V A N R I A V D K G F D T L I A A T D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T T
S S
T T T T T S
S S S
T T
S
S S
S S
S S S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence S D L A L I D T H L S G E N S T L I A N S M H N M A I G T L M Q R E V G R E Q P G V L T F L S E Q Y V G D D T L F Y T K L H T T D T K V F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S T T S T T S S T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence K V A A S I F D T V A K C G H E A S P S K T M M T P Y S V E K T Q T H A K Q G C Y V P Q D R M M I I S S E R R K D I E D V Q G Y V R S Q V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T T
T T
S S
T T
S S
S S
S S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence T M I T K V S R G F C H D L A Q L I L M L K T T F I G A W K M K R T I K E D A M Y R D R K F D S N D E D G F T L I Q I R N P L A L Y V P I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S S S
S
T T T
T T T S S S
G G G G T S
T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence W N G Y G A H P A A L N I V M T E E M Y V D S I M I S K L D E I M A P I R R I V H D I P P C W N E T Q G D K R G L I S A T K M S F F S K M A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
B
S S
S S S B
S T T S T T T S S S S
S S S
S S S S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence R P A V Q A A L S D P Q I I N L V E E L P L G E F S P G R I S R T M M H S A L L K E S S A R T L L S S G Y E L E Y Q K A L N S W I T Q V S M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T S T T G G G
T T T T T S T T T T T
S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence R L G E E S G V I S T S Y A K L F D V Y F E G E L D G A P H M F P D Q N L S P Q F Y I Q K M M I G P R V S S R V R N S Y V D R I D V I L R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
G G G G G G S
S
S
B
S
T T

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence D V V M R G F I T A N T I L N V I E K L G T N H S V G D L V T V F T L M N I E T R V A E E L A E Y M T S E K I R F D A L K L L K K G I A G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T
S
T T T
T T S S T T
S
S S S
S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence E F T M S L N V A T Q D F I D T Y L A Y P Y Q L T K T E V D A I S L Y C T Q M I M L R A A L G L P K K K M K I V V T D D A K K R Y K I R L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B S
S S
S S
T T
S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 .

Sequence R F R T H V P K I K V L K K L I D P N R M T V R N L E N Q F V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T
T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	A	I	T	V	Q	G	A	Q	L	I	K	R	V	V	E	R	F	Y	P	G	I	A	F	N	I	N	E	G	A	C	Y	I	Y	K	F	S	D	H	I	R	R	I	R	M	K	H	G	T	K	Y	R	R	Q	A	E	E	I	I	R	N	I	S	L	R	K	E	R	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																S	S	S					S	S	S	S																			T			S	S												T	T					T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	I	P	V	L	D	E	V	E	W	K	Y	V	F	D	G	Q	T	F	Q	S	Y	A	F	E	V	Y	V	N	S	I	L	P	W	S	E	L	D	P	E	E	E	F	L	R	N	Y	R	V	S	R	E	M	T	E	V	E	K	F	I	E	F	R	A	K	N	E	M	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			B						S	S	T	T	S		S	S													T		B		G	G	G			T	T		S	S				B				S	S			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	G	D	I	P	I	K	V	W	C	C	F	I	N	E	L	S	A	E	L	K	H	V	P	L	G	M	Q	V	M	A	D	F	V	N	R	F	D	S	P	F	H	Q	G	N	R	D	L	S	N	L	E	D	F	Q	V	A	Y	T	T	P	L	L	F	E	M	C	C	M	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S																T	T														T	T	S			S			B		S	S	S	S	S		B					S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	I	L	E	F	N	I	K	M	R	M	R	E	E	E	I	S	A	L	E	F	G	D	M	K	V	D	P	V	G	L	L	R	E	F	F	I	L	C	L	P	H	P	K	K	I	N	N	V	L	R	A	P	Y	S	W	F	V	K	M	W	G	V	G	A	D	P	I	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T		S	S				T	T																T	S	S	S								S									T	T	S	S	T	T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	Q	S	T	A	G	D	D	R	N	S	K	D	V	F	Y	D	K	F	R	T	E	P	N	R	Y	K	A	L	F	R	S	S	F	Y	N	E	S	R	R	M	N	E	E	K	I	L	E	A	V	K	Y	S	Q	K	L	G	S	H	D	R	R	L	P	L	F	E	K	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	T	T															T	T	S	S	T	T	S	S	T	T																							S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	T	V	Y	T	T	P	F	Y	P	H	K	S	S	N	M	I	L	A	S	F	L	L	S	I	Q	T	I	T	G	Y	G	R	A	W	V	K	N	V	S	T	E	F	D	K	Q	L	K	P	N	P	S	N	L	V	Q	D	V	S	D	L	T	R	E	F	F	K	Q	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T	S				T	T	S													G	G	G	G	G		S	B											T	T	S	S					S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	E	A	K	E	R	R	E	E	I	V	K	P	E	D	L	Y	T	S	M	L	R	L	A	R	N	T	S	S	G	F	S	T	E	I	Y	V	K	K	R	F	G	P	L	I	K	I	N	S	R	I	K	A	L	V	I	F	T	K	G	H	T	V	F	T	D	E	E	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T						G	G	G																S																					S	S	G	G	G	G	T	S	T	T	T	S	S	S					S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	K	Y	N	S	V	E	L	Y	Q	T	K	G	S	R	D	V	P	I	K	A	T	R	T	I	Y	S	I	N	L	S	V	L	V	P	Q	L	I	V	T	L	P	L	N	E	Y	F	S	R	V	G	G	I	T	S	P	D	Y	K	K	I	G	G	K	V	I	V	G	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	T	T	S		B							B	S	S	S																			T	T								T								T	T	S							B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	R	V	M	D	A	A	D	C	F	R	N	S	A	D	R	D	I	F	T	I	A	I	D	Y	S	E	Y	D	T	H	L	T	R	H	N	F	R	T	G	M	L	Q	G	I	R	E	A	M	A	P	Y	R	D	L	R	Y	E	G	Y	T	L	E	Q	I	I	D	F	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S	S							T	T		T	T									T	T		T	T	T	S	S	S															T	G	G	G		S			B	T	T	B										T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	E	G	R	V	A	N	T	L	W	N	G	K	R	R	L	F	K	T	T	F	D	A	Y	I	R	L	D	E	S	E	R	D	K	G	S	F	K	V	P	K	G	V	L	P	V	S	S	V	D	V	A	N	R	I	A	V	D	K	G	F	D	T	L	I	A	A	T	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T	T	T					S	S													T	T	T	T	T	S				S	S	S				T	T					S		S						S				S	S								S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	D	L	A	L	I	D	T	H	L	S	G	E	N	S	T	L	I	A	N	S	M	H	N	M	A	I	G	T	L	M	Q	R	E	V	G	R	E	Q	P	G	V	L	T	F	L	S	E	Q	Y	V	G	D	D	T	L	F	Y	T	K	L	H	T	T	D	T	K	V	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T	S	T	T																								S	T	T	S	S									T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	K	V	A	A	S	I	F	D	T	V	A	K	C	G	H	E	A	S	P	S	K	T	M	M	T	P	Y	S	V	E	K	T	Q	T	H	A	K	Q	G	C	Y	V	P	Q	D	R	M	M	I	I	S	S	E	R	R	K	D	I	E	D	V	Q	G	Y	V	R	S	Q	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S					T	T	T					T	T					S	S					T	T										S	S			S	S					S	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	T	M	I	T	K	V	S	R	G	F	C	H	D	L	A	Q	L	I	L	M	L	K	T	T	F	I	G	A	W	K	M	K	R	T	I	K	E	D	A	M	Y	R	D	R	K	F	D	S	N	D	E	D	G	F	T	L	I	Q	I	R	N	P	L	A	L	Y	V	P	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T														T	T	S	S	S		S								T	T	T									T	T	T	S	S	S									G	G	G	G	T	S		T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	W	N	G	Y	G	A	H	P	A	A	L	N	I	V	M	T	E	E	M	Y	V	D	S	I	M	I	S	K	L	D	E	I	M	A	P	I	R	R	I	V	H	D	I	P	P	C	W	N	E	T	Q	G	D	K	R	G	L	I	S	A	T	K	M	S	F	F	S	K	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S			B		S	S		S	S	S	B												S	T	T	S	T	T	T	S						S	S	S												S	S	S				S	S	S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	R	P	A	V	Q	A	A	L	S	D	P	Q	I	I	N	L	V	E	E	L	P	L	G	E	F	S	P	G	R	I	S	R	T	M	M	H	S	A	L	L	K	E	S	S	A	R	T	L	L	S	S	G	Y	E	L	E	Y	Q	K	A	L	N	S	W	I	T	Q	V	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		T	T							T	S	T	T	G	G	G		T	T	T										T	T	S					T	T	T	T														T			S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	R	L	G	E	E	S	G	V	I	S	T	S	Y	A	K	L	F	D	V	Y	F	E	G	E	L	D	G	A	P	H	M	F	P	D	Q	N	L	S	P	Q	F	Y	I	Q	K	M	M	I	G	P	R	V	S	S	R	V	R	N	S	Y	V	D	R	I	D	V	I	L	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		S	S	S				G	G	G	G	G	G	S																S															S		B			S																T	T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	D	V	V	M	R	G	F	I	T	A	N	T	I	L	N	V	I	E	K	L	G	T	N	H	S	V	G	D	L	V	T	V	F	T	L	M	N	I	E	T	R	V	A	E	E	L	A	E	Y	M	T	S	E	K	I	R	F	D	A	L	K	L	L	K	K	G	I	A	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S												T		S													T	T	T														T	T	S	S	T	T			S							S	S	S		S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	E	F	T	M	S	L	N	V	A	T	Q	D	F	I	D	T	Y	L	A	Y	P	Y	Q	L	T	K	T	E	V	D	A	I	S	L	Y	C	T	Q	M	I	M	L	R	A	A	L	G	L	P	K	K	K	M	K	I	V	V	T	D	D	A	K	K	R	Y	K	I	R	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	B	S		S	S												S	S																							T	T												S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.
Sequence	R	F	R	T	H	V	P	K	I	K	V	L	K	K	L	I	D	P	N	R	M	T	V	R	N	L	E	N	Q	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S						T	T	T				T	T						S