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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6pijI_

Fold library idPDB HeaderMoleculeTitle
c6pijI_2.90PDB header: rna binding protein/rna/dnaChain: I: PDB Molecule: tniq monomer i;


Added to library: Sat Oct 5 08:20:44 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AMFLQRPKPYSDESLESFFIRVANKNGYGDVHRFLEATKRFLQDIDHNGYQTFPTDITRINPYSAKNSSS
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Known secondary structure (DSSP)









S


SSTTTTTS


SSS

TTTT
S
SSSTT
STTS

S

 .........80.........90.........100.........110.........120.........130.........140
Sequence ARTASFLKLAQLTFNEPPELLGLAINRTNMKYSPSTSAVVRGAEVFPRSLLRTHSIPCCPLCLRENGYAS
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Known secondary structure (DSSP) TTSSSSS

S
SSSS

S
TTTT
SSSS






S





SSS




SS
SS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence YLWHFQGYEYCHSHNVPLITTCSGHEAACTVSNWLAGHESKPLPNLPKSYRWGLVHWWMGIKDSDHFSFV
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Known secondary structure (DSSP) SSGGG




SSS

SS
TTT



S
SSSSSSS

TTS



TTTSS



SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QFFSNWPRSFHSIIEDEVEFNLEHAVVSTSELRLKDLLGRLFFGSIRLPERNLQHNIILGELLCYLENRL
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Known secondary structure (DSSP) TTTTTT
SS
SSS
BSSSSS
TTS
SSSS
SSS
TS
 .........290.........300.........310.........320.........330.........340.........350
Sequence WQDKGLIANLKMNALEATVMLNCSLDQIASMVEQRILKPNRKSKDVTDYLFHFGDIFCLWLAEFQSDEFN
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Known secondary structure (DSSP) SSSSSTTTS

T

STTSS

SS




SS




SSS
 ........
Sequence RSFYVSRW
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Known secondary structure (DSSP) GGGSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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