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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6pgwA_

Fold library idPDB HeaderMoleculeTitle
c6pgwA_3.00PDB header: cell adhesionChain: A: PDB Molecule: protocadherin-19;


Added to library: Mon Jan 4 15:42:57 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VFDEPVYTVNVLENSPINTLVIDLNATDPDEGTNGEVVYSFINFVSNLTKQMFKIDPKTGVITVNGVLDH
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Known secondary structure (DSSP)

SSSTT

TT






SS

S


SSGGGGGT
TTT

S


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence EELHIHEIDVQAKDLGPNSIPAHCKVIVNVIDINDNAPEIKLLSENSEMVEVSENAPLGYVIALVRVSDN
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Known secondary structure (DSSP) TT
S

SSS




S




SSTT
TT

TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence DSGANGKVQCRLQGNVPFRLNEFESFSTLLVDGRLDREQRDMYNLTILAEDSGYPPLRSSKSFAVKVTDE
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Known secondary structure (DSSP) S
GGGT


SS
S


SS



S


TTT
SSSSS



 .........220.........230.........240.........250.........260.........270.........280
Sequence NDNPPYFTKPHYQAMVLENNVPGAFLLAVSARDPDLGMNGTVSYEIIKSEVRGMSVESYVTVNSNGEIYG
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Known secondary structure (DSSP)

S

S
STT

TT



SSGGGG





STTT
STTT
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VRAFNHEDTRTFEFKVSAKDGGDPPLTSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPKNAGVGYLV
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Known secondary structure (DSSP)
S


TTT
S

SSS








S

BTTTT

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TQIKADDYDEGENGRLTYSISEGDMAYFEIDQINGEVRTTKTFGENAKPSYQITVVAHDHGQTSLSASAY
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Known secondary structure (DSSP)


S
GGGG

STTT
TTT

S


SS

S

SSS

 .......
Sequence IVIYLSP
Predicted secondary structure

SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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