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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6pfxB_

Fold library idPDB HeaderMoleculeTitle
c6pfxB_1.50PDB header: transferaseChain: B: PDB Molecule: d-alanyl transferase dltd;


Added to library: Sat Jul 6 10:27:57 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPETIRRASSSMSVNVLKGDAIKNYALSEKQYIPFFGSSELSRISPFHPSVLAEKYQRNYRPFLLGAPGT
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Known secondary structure (DSSP)



SSTT
BGGGG

STTSTT
S


BTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QSLSQYMMMRSAGDAMKNKKVVFIISPQWFVKNGVKTDYFNTYYSELQTYDWLFSMKKVTPADRYLARRL
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Known secondary structure (DSSP)
GGGGTT


GGG

TT
S



SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence LTFSKVKENDTLTAILQTIKKGKLPLPESLNQLRSQWNMLKREDEVDRQQKIDHESKRLPKQYQETELSI
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Known secondary structure (DSSP) TTST
TT



GGG


TTS
SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence LANQIGERETTNNPFGLKNDFYTHRIRAHEPELKQSQKNWDYRFSPEFSDFQLVLDQLAKNHNEVLFIIP
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Known secondary structure (DSSP)
TTSSS


TGGGTGGGTTTTTT


SS
TTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence PVNEKWSDYTGLSQEMLQGFAKKIKFQLNSQGFNRIADFVNQAGTNYFMEDTIHLGWKGWLAADQQIRPF
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Known secondary structure (DSSP)





TT



GGGTTSTTSBSSSSSB
 .........360.........370.........380..
Sequence LEENHITASKYHLDDAFFSKSWQHQIPDKLQL
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Known secondary structure (DSSP) TTSS








GGGGS

GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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