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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6p6jA_

Fold library idPDB HeaderMoleculeTitle
c6p6jA_3.40PDB header: transport proteinChain: A: PDB Molecule: inner membrane abc-transporter;


Added to library: Sat Mar 7 12:12:44 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WQVITPVRRKVILAMALAGLAALTSLGALLFLAWSLRDIRATPDAIPAWPLGGVIGCVVLTFVLRLQAFN
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Known secondary structure (DSSP)

TT
S
TSTTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence TSHYAAFHLENILRSRLARKALQLPPGVLQQMGSGSVAKVMLDDVKSLHIFVADSTPLYARAIIMPLATI
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Known secondary structure (DSSP) TSS
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VILFWLDWRLAIATLGVLAFGSVVLVLARQRSENMAQRYHKAREQVSAAVIEFVQAMPVVRTFDSGSTSF
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Known secondary structure (DSSP)
TTTTTTSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRYQRALEEWVDVLKTWYRKAGFSARFSFSILNPLPTLFVLIWSGYGLLHYGSFDFIAWVAVLLLGSGMA
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Known secondary structure (DSSP) SSTS


 .........290.........300.........310.........320.........330.........340.........350
Sequence EAVMPMMMLNNLVAQTRLSIQRIYQVLAMPELSLPQSDQQPQEASITFEQVSFHYPQARTGAALQEVSFH
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Known secondary structure (DSSP) GGGTST
S
TT




S



S


SSSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence VPAGQIVALVGPSGAGKSTVARLLLRYADPDKGHIRIGGVDLRDMQTDTLMKQLSFVFQDNFLFADTIAN
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Known secondary structure (DSSP)
TT


SSSSTTTTTSS

SS
TTSSS



SS



SSTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NIRLGAPDTPLEAVIAAARVAQAHDFISALPEGYNTRVGERGVFLSGGQRQRITIARALLQDRPILVLDE
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Known secondary structure (DSSP) TSS
SSSS

SSSTTTTSTTGGG


TTTS

TTT

SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ATAFADPENEAALIKALAAAMRGRTVIMVAHRLSMVTQADVILLFSDGQLREMGNHTQLLAQGGLYQRLW
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Known secondary structure (DSSP) TT
S

STTS
SSTTTTTS
STT


S
TS
 .........570.
Sequence QHYQQAQHWVP
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Known secondary structure (DSSP) SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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