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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6oycB_

Fold library idPDB HeaderMoleculeTitle
c6oycB_2.35PDB header: sugar binding proteinChain: B: PDB Molecule: glycosylation associate protein 2;


Added to library: Sat May 23 08:23:03 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SKIKLTILQVGEENWATKENIPNNMEWLFIKPDQISDFVTTENNYLTSSKLLQKLPRKISALLLTEQTYG
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Known secondary structure (DSSP)



SSS
GGGTS


TT
GGGTT







SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence PELSSLSSFFEVYEVFYPKDKHATGITEEFLRSKMAQRYDSSSPDQLIRQFYKGLFIGQYGEKLQVSQIQ
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Known secondary structure (DSSP) GGGGGGGGG

TT
TT



TT

TT


SS


GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence IRNDFEGVVNYQGNNYLELEGQFGENYSFLLNFAYNIPFSSDFYNELFLEHIIEGDIDIRLVISLIVDGS
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Known secondary structure (DSSP)
TT

STTTSS

SSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VDDIAKEWYFEKEDLNQLISLESDISGSLAVKLFAKGKGIVKLGPLHRRNGRGGLGTFLLGGERHIDAIG
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Known secondary structure (DSSP) SS
GGGGGS


S


TTS
SSSTT

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence HEFMTYFDPVDFKPPLTVYFSGFRSAEGFEGFWMMKSMKTPFMLICDPRLQGGAFYIGSKEYEQKIVDAI
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Known secondary structure (DSSP)

TTS
S




SS
S
S
TTS



TTT

TT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence QEKLAFLNFSSDQLILSGLSMGTYGATYHGAKLNPHAIIIGKPIFNLGTVAQRERLERPDGFATSLDIQL
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Known secondary structure (DSSP) T

GGGTTTT

SS



GGGS

SS

TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LNQGDLTSSSSEKLNNYFWKSIEEGDFSNTTFALAYMKNDDYDATAFSDLLQYFRGKKHKILGRGWDGRH
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Known secondary structure (DSSP) SS

TS

TT
TT
SS
TTTTSS
STT
S
T
 .........500.........510.......
Sequence GDCSAEVGAWFTSQYRRMLSNDFGRKE
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Known secondary structure (DSSP) TSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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