Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6otjA_

Fold library idPDB HeaderMoleculeTitle
c6otjA_2.85PDB header: ligaseChain: A: PDB Molecule: tyrosine--trna ligase;


Added to library: Sat May 18 08:28:09 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPIALVG
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)

TT

SS
S




SSS
BGGGTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence GATGMIGDPSFKAAERSLNSAETVAGWVGSIRSQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGK
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TTGGGT


TT
SS





GGGS


STT

TTT

TGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence HFSVNAMLNKESVKQRIDRDGAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRR
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) G

T
STTS



T

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSIEEIG
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)









TTS

SS
BTTB

BSSTTTS
T





 .........290.........300.........310.........320.........330.........340.........350
Sequence VVEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSRLTESDFEQLALDGLPAFEVS
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) SSS

S
TTSS

TT

TS

 .........360.........370.........380.........390.........400.........410.........420
Sequence DGINAVEALVKTGLAASNKEARGFVNAKAVLLNGKPAEANNPNHPDDAYLLIGEYKRFGKYTILRRGKRN
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) TT
BTTS
SSTT
TT









TTSB

GGG
BTTTSSS
 ........
Sequence HALLVWKY
Predicted secondary structure
SS confidence







Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D