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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6om1D_

Fold library idPDB HeaderMoleculeTitle
c6om1D_2.66PDB header: immune systemChain: D: PDB Molecule: integrin beta-8;


Added to library: Sat Dec 14 08:38:07 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NTQVTPGEVSNFMLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVDLSRKMAFFSRDFRLGFGSYVDKT
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Known secondary structure (DSSP)

SSB
SB





SS


SGGGTT


S



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VSPYISIHPERNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAMLQAAVCESHIGWR
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Known secondary structure (DSSP) STTTS

STT








SS
S





SSSSB

T

 .........150.........160.........170.........180.........190.........200.........210
Sequence KEAKRLLLVMTDQTSHLALDSKLAGIVCPNDGNCHLKNNVYVKSTTMEHPSLGQLSEKLIDNNINVIFAV
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Known secondary structure (DSSP) TTS
SS
B

GGGGGTTT

B



S

BSSSBBGGGGTB



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QGKQFHWYKDLLPLLPGTIAGEIESKAANLNNLVVEAYQKLISEVKVQVENQGIYFNITAICPDPGMEGC
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Known secondary structure (DSSP)
STTTGGGSTT

TT


T












SS

 .........290.........300.........310..
Sequence RNVTSNDEVLFNVTVTNYAIIKPIGFNETAKI
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Known secondary structure (DSSP)



TT





TT
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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