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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6oitE_

Fold library idPDB HeaderMoleculeTitle
c6oitE_3.50PDB header: plant proteinChain: E: PDB Molecule: protein defective in meristem silencing 3;


Added to library: Sat Jul 27 08:27:59 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AEFAMFNSKRLESDLEAMGNKIKQHEDNLKFLKSQKNKMDEAIVDLQVHMSKLEDINAQILRHENSAAGV
Predicted secondary structure
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Known secondary structure (DSSP)



TT
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSLVETLLMLTKGVVGVVAKLGKVNDENLSQILSNYLGTRSMLAVVCRNYESVTALEAYDNHGNIDINAG
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Known secondary structure (DSSP) T


STTTTTTS
S

TTTSS
SS

B
SSSSB
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LHCLGSSIGREIGDSFDAICLENLRPYVGQHIADDLQRRLDLLKPKLPNGECPPGFLGFAVNMIQIDPAY
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Known secondary structure (DSSP) T



S




BTTTS



S
B
TT
SS

B






SSSS

TTSSTTS
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLCVTSYGYGLRETLFYNLFSRLQVYKTRADMISALPCISDGAVSLDGGIIRKTGIFNLGNRDEVNVRFA
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Known secondary structure (DSSP) SSS
STT


STTTSS
S
SSTTGGG

S
TTS

SSS



SS



S


B
 .........290.........300.........310.........320.........330......
Sequence KPTASRTMDNYSEAEKKMKELKWKKEKTLEDIKREQVLREHAVFNFGKKKEEFVRC
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Known secondary structure (DSSP)






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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