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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ohyA_

Fold library idPDB HeaderMoleculeTitle
c6ohyA_4.10PDB header: viral proteinChain: A: PDB Molecule: envelope glycoprotein gp160;


Added to library: Sat Jun 8 08:19:04 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ENWWVTVYYGVPVWREAKTTLFCASDAKSYHNIWATQACVPTDPTPQEVLLPNVTEEFNMWENYMVDQMQ
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Known secondary structure (DSSP)





SS







B
S




TTTT
SS
B

SS

TT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence EDIISLWEQSLKPCVKLTPLCVTLTCNNPTNTDDRLGDMRNCSFNVTTELRDKKRKVYSLFYVEDITAIG
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Known secondary structure (DSSP) TSSS
B
GGG
S






GGGG
TTSS
GGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NNSTYRLINCNTTAITQACPKTSFEPIPIHYCAPAGFALLKCNDIDYKGNETCKNVSTVHCTHGIKPVAT
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Known secondary structure (DSSP) SSS
SSSSS



TT






B

TT

S


SSSSB


B




 .........220.........230.........240.........250.........260.........270.........280
Sequence TQLILNGSTADNQTVARIDPSENLAIIQLKDPVKITCRRPGNNTRGQIQIGPAMTFYNIENVVGDTRKAY
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Known secondary structure (DSSP) SSSS



SSS

SSSS
S
TT
S




 .........290.........300.........310.........320.........330.........340.........350
Sequence CEINGTQWAKALNETKEVLRNILRKNISFMVPSGGDPEVTNHHFNCGGEFFYCNTSEIINITKINKTENM
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Known secondary structure (DSSP)

S
B





SS
TTTSS


SS


TTTS
TT
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TIIPCRIRQIVNSWMRVGKGIFAPPIRGNITCTSNITGMLLEIHKNREDQGEDQDQNNTYVCLTGGNMKD
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Known secondary structure (DSSP) SGGGTT






S




TTTSSS

TT
B








S
 .........430.........440.......
Sequence IWRSELYKYKIVEIQPLGVAPTKCRRY
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Known secondary structure (DSSP) TT
SS





S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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