PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6oaoJ_

Fold library id	PDB Header	Molecule	Title
c6oaoJ_	3.50	PDB header: cell invasion	Chain: J: PDB Molecule: antibody 092096 single chain variable fragment;

Links to external resources
Added to library: Sat Jun 15 08:58:31 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q V Q L V Q S G A E V K K P G A S V K V S C K V S G Y T L T E L S M H W V R Q A P G K G L E W M G G F D R E D G E S I Y A Q K F Q G R V T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
G G G
S S S
T T T
G G G T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T E D T S T D S V Y M E L S N L R S D D T A V Y F C A T D F G G S Y F Y A F D I W G Q G T M V T V S Q S V L T Q S P S A S G T P G Q R V T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S
G G G
S S
S S
S B
S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S C S G S S S N I G R N P V N W F Q H L P G T A P Q L L I Y S N D Q R P S G V P D R F S G S K S G T S A S L A I S G L Q S E D E A D Y Y C E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
B T T T B
S S S
T T T T S S
S T T
S

. . . . . . . . . 220 . . . . . . . .

Sequence A W D D S L N G V V F G G G T K L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T B
B

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	V	Q	L	V	Q	S	G	A	E	V	K	K	P	G	A	S	V	K	V	S	C	K	V	S	G	Y	T	L	T	E	L	S	M	H	W	V	R	Q	A	P	G	K	G	L	E	W	M	G	G	F	D	R	E	D	G	E	S	I	Y	A	Q	K	F	Q	G	R	V	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T											S	S		G	G	G										S	S	S										T	T	T							G	G	G	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	E	D	T	S	T	D	S	V	Y	M	E	L	S	N	L	R	S	D	D	T	A	V	Y	F	C	A	T	D	F	G	G	S	Y	F	Y	A	F	D	I	W	G	Q	G	T	M	V	T	V	S	Q	S	V	L	T	Q	S	P	S	A	S	G	T	P	G	Q	R	V	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T								S			G	G	G										S	S		S	S																			S	B				S						T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	C	S	G	S	S	S	N	I	G	R	N	P	V	N	W	F	Q	H	L	P	G	T	A	P	Q	L	L	I	Y	S	N	D	Q	R	P	S	G	V	P	D	R	F	S	G	S	K	S	G	T	S	A	S	L	A	I	S	G	L	Q	S	E	D	E	A	D	Y	Y	C	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S									T	T	S							B	T	T	T	B			S	S	S		T	T							T	T							S	S			S	T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	A	W	D	D	S	L	N	G	V	V	F	G	G	G	T	K	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T					B				B